Best Alignments for T0407

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1m65A	8.7195e-19	1m65A/T0407-1m65A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
2hnhA	1.9639e-18	2hnhA/T0407-2hnhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yxoA	7.2632e-17	2yxoA/T0407-2yxoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2anuA	1.5880e-14	2anuA/T0407-2anuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
2qulA	1.1549e-01	2qulA/T0407-2qulA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v77A	1.4131e-01	1v77A/T0407-1v77A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.2
2f6kA	1.6959e-01	2f6kA/T0407-2f6kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.15
2gzxA	2.7022e-01	2gzxA/T0407-2gzxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ob3A	4.0365e-01	2ob3A/T0407-2ob3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yixA	4.2493e-01	1yixA/T0407-1yixA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
2ffiA	4.2989e-01	2ffiA/T0407-2ffiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.15
3xis	6.5710e-01	3xis/T0407-3xis-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qahA	7.8233e-01	2qahA/T0407-2qahA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q02A	8.0660e-01	2q02A/T0407-2q02A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qw5A	8.6559e-01	2qw5A/T0407-2qw5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dvtA	9.9661e-01	2dvtA/T0407-2dvtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.15
3c86A	1.0695e+00	3c86A/T0407-3c86A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
4xis	1.1992e+00	4xis/T0407-4xis-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xwyA	1.2301e+00	1xwyA/T0407-1xwyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
1muwA	1.2574e+00	1muwA/T0407-1muwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.15.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001