# List of top-scoring protein chains for T0407.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1ckvA	141	17.47	d.137.1.1	41452
2pocA	367	23.34		
2ob0A	170	30.53		
1xp3A	307	36.05	c.1.15.1	122210
1dbrA	231	57.24	c.61.1.1	34041
1fsgA	233	57.54	c.61.1.1	34029
1md6A	154	71.65	b.42.1.2	91242
1ftaA	337	73.92	e.7.1.1	42934
1qk5A	233	74.86	c.61.1.1	34035
2fieA	338	75.59		
1myoA	118	78.30	d.211.1.1	19174
2calA	154	82.65		
1e30A	155	82.70	b.6.1.1	23016
1a3zA	155	82.92	b.6.1.1	23019
1rcyA	151	83.01	b.6.1.1	23018
1curA	155	83.35	b.6.1.1	23021
1gy2A	155	83.45	b.6.1.1	70726
1yyzA	337	88.88		
1nuyA	337	89.28	e.7.1.1	86213
1fj9A	337	89.38	e.7.1.1	42907
2f3bA	338	89.78	e.7.1.1	132861