# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1sraA	151	28.59	a.39.1.3	17190
1q5hA	147	31.60	b.85.4.1	95893
2ol1A	147	36.15		
1dunA	134	47.63	b.85.4.1	28371
2fqxA	318	49.80		
2o6pA	161	53.68		
2bzyA	67	57.79		
2jg0A	535	58.64		
1b5lA	172	58.70	a.26.1.3	16900
2p22D	79	61.83		
1ly1A	181	62.70	c.37.1.1	74334
1kpsB	171	64.26	a.118.12.1	68787
2jmkA	111	69.92		
1b5l	172	70.63		
1f42A	306	72.53	b.1.1.4,b.1.2.1,b.1.2.1	59636,59637,59638
1keqA	248	73.47	b.74.1.1	72387
2h2zA	306	81.10		
1x9lA	149	82.03	b.2.10.1	109528
2nttA	217	82.19		
3cjlA	88	83.86		
2gysA	419	85.76	b.1.2.1,b.1.2.1,b.1.2.1,b.1.2.1	135865,135866,135867,135868
1sra	151	88.07