Best Alignments for T0407

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2anuA	2.9097e-19	2anuA/T0407-2anuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
1m65A	1.1360e-18	1m65A/T0407-1m65A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
2yxoA	4.1451e-16	2yxoA/T0407-2yxoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hnhA	4.5312e-09	2hnhA/T0407-2hnhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w1iE	4.2884e-01	1w1iE/T0407-1w1iE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.1
1fkx	5.6396e-01	1fkx/T0407-1fkx-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nzlA	6.5355e-01	2nzlA/T0407-2nzlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rduA	6.5895e-01	2rduA/T0407-2rduA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vflA	8.2813e-01	1vflA/T0407-1vflA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.1
2pgfA	9.0114e-01	2pgfA/T0407-2pgfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a4mA	1.3443e+00	1a4mA/T0407-1a4mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.1
2amxA	1.9880e+00	2amxA/T0407-2amxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.1
2qulA	2.3958e+00	2qulA/T0407-2qulA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h5yA	2.8174e+00	1h5yA/T0407-1h5yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.2.1
1i60A	3.3338e+00	1i60A/T0407-1i60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.15.4
2hk0A	6.5751e+00	2hk0A/T0407-2hk0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xi3A	7.1072e+00	1xi3A/T0407-1xi3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.3.1
2qw5A	7.6563e+00	2qw5A/T0407-2qw5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y0eA	8.3689e+00	1y0eA/T0407-1y0eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.2.5
2du2A	9.9439e+00	2du2A/T0407-2du2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001