Best Alignments for T0407

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2yxoA	2.3985e-18	2yxoA/T0407-2yxoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2anuA	2.5831e-18	2anuA/T0407-2anuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
1m65A	3.4414e-17	1m65A/T0407-1m65A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
2hnhA	8.6999e-15	2hnhA/T0407-2hnhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v77A	9.3114e-07	1v77A/T0407-1v77A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.2
2qahA	1.3085e-01	2qahA/T0407-2qahA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ffiA	5.0618e-01	2ffiA/T0407-2ffiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.15
1j6oA	7.3994e-01	1j6oA/T0407-1j6oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
2icsA	8.5933e-01	2icsA/T0407-2icsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.92.1.8 c.1.9.14
2gzxA	8.7085e-01	2gzxA/T0407-2gzxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z00A	9.3684e-01	2z00A/T0407-2z00A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f6kA	1.3293e+00	2f6kA/T0407-2f6kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.15
2vc7A	1.5084e+00	2vc7A/T0407-2vc7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zzmA	1.5707e+00	1zzmA/T0407-1zzmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
1xwyA	1.6573e+00	1xwyA/T0407-1xwyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
1vc4A	1.8334e+00	1vc4A/T0407-1vc4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.2.4
2qpxA	2.1212e+00	2qpxA/T0407-2qpxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qtwA	2.3344e+00	1qtwA/T0407-1qtwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.15.1
2gokA	2.3444e+00	2gokA/T0407-2gokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yixA	2.6787e+00	1yixA/T0407-1yixA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001