# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1y10A	407	7.326		
2co7B	221	8.701		
2z43A	324	9.566		
1y0eA	223	18.73	c.1.2.5	116297
1fjgK	129	22.47	c.55.4.1	33733
1p5vA	235	26.36	b.1.11.1,b.7.2.1	87812,87813
1xbyA	216	30.41	c.1.2.3	121846
2nqrA	411	36.75	b.85.6.1,b.103.1.1,c.57.1.2	138490,138491,138492
1jkeA	145	37.36	c.110.1.1	66791
2uubK	129	39.39	c.55.4.1	139942
1plq	258	39.47		
2himA	358	42.90		
1n1tA	641	43.64	b.29.1.15,b.68.1.1	79821,79822
1vh7A	265	55.03	c.1.2.1	100646
2h9fA	396	57.28		
2ej8A	160	59.30		
1fgs	428	61.00		
1z9lA	128	63.16		
2yv5A	302	63.44		
1wxaA	116	65.61	d.15.1.5	121395
1euaA	213	67.25	c.1.10.1	29155
1wexA	104	69.61	d.58.7.1	114568
2gm6A	208	71.98		
2ifaA	208	73.39	d.90.1.1	137329
2j2zA	218	73.84	b.1.11.1,b.7.2.1	137974,137975
1j7gA	144	74.42	c.110.1.1	84130
1ha1	184	83.78