# List of top-scoring protein chains for t06-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1sxjC	340	5.849	a.80.1.1,c.37.1.20	106085,106086
1vmeA	410	5.926	c.23.5.1,d.157.1.3	108893,108894
1keqA	248	15.36	b.74.1.1	72387
2hr2A	159	18.05		
2ifaA	208	25.63	d.90.1.1	137329
2o6pA	161	31.19		
2pd1A	104	34.35		
1w5tA	412	45.08	a.4.5.11,c.37.1.20	114255,114256
1in4A	334	46.95	a.4.5.11,c.37.1.20	62597,62598
2cw9A	194	50.48	d.17.4.13	130920
1rknA	110	50.52	b.40.1.1	111855
2eefA	156	53.62		
1iyhA	198	53.84	a.45.1.1,c.47.1.5	83790,83791
1gskA	513	56.14	b.6.1.3,b.6.1.3,b.6.1.3	83314,83315,83316
1mspA	126	61.37	b.1.11.2	22333
2p91A	285	63.84		
2i5eA	211	65.12		
1fwxA	595	66.53	b.6.1.4,b.69.3.1	60069,60070
2iwkA	642	71.78		
1ibyA	112	72.16	b.6.1.4	62233
2nmxA	260	73.54	b.74.1.1	138382
1n0qA	93	74.53	k.37.1.1	79754
1fjgK	129	79.19	c.55.4.1	33733
1l6wA	220	80.37	c.1.10.1	73632
2pbcA	102	83.16		
2iiaA	131	83.53		
1ka9H	200	84.72	c.23.16.1	77308
2hfxA	260	85.73