# List of top-scoring protein chains for T0407.t04-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2p4oA	306	12.21		
1xp3A	307	15.13	c.1.15.1	122210
1f42A	306	28.65	b.1.1.4,b.1.2.1,b.1.2.1	59636,59637,59638
1eboA	131	60.79	h.3.2.1	45757
2gfqA	298	61.04	c.56.7.1	135106
1rxiA	131	66.83	c.44.1.1	105116
1m98A	317	72.57	a.175.1.1,d.17.4.6	78866,78867
1ftaA	337	75.24	e.7.1.1	42934
2fieA	338	80.65		
1ov9A	50	84.85	a.155.1.1	93591
2cd7A	131	85.45		
1z5zA	271	89.05	c.37.1.19	124499