Best Alignments for T0407

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2p22D	5.6073e+01	2p22D/T0407-2p22D-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y03A	5.8708e+01	1y03A/T0407-1y03A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ol1A	6.0273e+01	2ol1A/T0407-2ol1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dyoA	6.4249e+01	1dyoA/T0407-1dyoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.7
1dunA	7.2603e+01	1dunA/T0407-1dunA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.4.1
2e6jA	7.4783e+01	2e6jA/T0407-2e6jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cfb	7.7722e+01	1cfb/T0407-1cfb-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2jmkA	8.1381e+01	2jmkA/T0407-2jmkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1f42A	8.5742e+01	1f42A/T0407-1f42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.4 b.1.2.1 b.1.2.1
1wn8A	8.7247e+01	1wn8A/T0407-1wn8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bsyA	9.3777e+01	2bsyA/T0407-2bsyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.4.1 b.85.4.1
1b5lA	9.6772e+01	1b5lA/T0407-1b5lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.26.1.3
1g6aA	9.8740e+01	1g6aA/T0407-1g6aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q5hA	9.8930e+01	1q5hA/T0407-1q5hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.4.1
2qmeI	1.0000e+02	2qmeI/T0407-2qmeI-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h2zA	1.0052e+02	2h2zA/T0407-2h2zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1neuA	1.0061e+02	1neuA/T0407-1neuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
2gysA	1.0082e+02	2gysA/T0407-2gysA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1
2o6pA	1.0260e+02	2o6pA/T0407-2o6pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1m40A	1.0330e+02	1m40A/T0407-1m40A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001