Best Alignments for T0407

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1ebaA	2.3290e+01	1ebaA/T0407-1ebaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
2zexA	3.2644e+01	2zexA/T0407-2zexA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ebpA	3.8032e+01	1ebpA/T0407-1ebpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
1y03A	4.0896e+01	1y03A/T0407-1y03A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gkmA	4.6197e+01	2gkmA/T0407-2gkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fimA	4.8107e+01	2fimA/T0407-2fimA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ermA	4.8116e+01	1ermA/T0407-1ermA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cq2A	5.0218e+01	2cq2A/T0407-2cq2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.7.1
2oznA	5.3235e+01	2oznA/T0407-2oznA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ten	5.4240e+01	1ten/T0407-1ten-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1iarB	5.6518e+01	1iarB/T0407-1iarB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
1wq8A	5.6864e+01	1wq8A/T0407-1wq8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.17.1.1
2j9oA	5.8480e+01	2j9oA/T0407-2j9oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bp3B	5.9794e+01	1bp3B/T0407-1bp3B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1k3xA	6.3082e+01	1k3xA/T0407-1k3xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.156.1.2 b.113.1.1 g.39.1.8
2jigA	6.3283e+01	2jigA/T0407-2jigA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qmeI	6.3387e+01	2qmeI/T0407-2qmeI-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e6jA	6.3783e+01	2e6jA/T0407-2e6jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jl3A	6.4472e+01	1jl3A/T0407-1jl3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j7vA	6.6623e+01	2j7vA/T0407-2j7vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001