# List of top-scoring protein chains for t06-w0.5-1-pb-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1hfcA	169	14.59	d.92.1.11	40335
2h2zA	306	18.30		
2p9wA	334	19.16		
2gysA	419	20.09	b.1.2.1,b.1.2.1,b.1.2.1,b.1.2.1	135865,135866,135867,135868
1widA	130	21.02	b.142.1.2	114667
2r4iA	123	31.43		
1x9lA	149	31.59	b.2.10.1	109528
2bzyA	67	31.92		
1lvoA	302	35.64	b.47.1.4	74284
2bsyA	278	39.75	b.85.4.1,b.85.4.1	129129,129130
1f42A	306	43.44	b.1.1.4,b.1.2.1,b.1.2.1	59636,59637,59638
2amdA	311	44.36		
2jmkA	111	45.65		
1s68A	249	50.24	d.142.2.4	98591
1sraA	151	53.14	a.39.1.3	17190
1rlrA	761	54.28	a.98.1.1,c.7.1.2	18753,30679
2p22D	79	55.25		
1os8A	223	57.28	b.47.1.1	93481
2qkiB	188	58.06		
2q6fA	309	59.06		
2p3wA	112	61.85		
1mmqA	170	63.02	d.92.1.11	40396
1b5lA	172	66.31	a.26.1.3	16900
2gmqA	118	70.18		
1y7wA	291	70.91		
1ibyA	112	72.80	b.6.1.4	62233
1q5hA	147	74.44	b.85.4.1	95893
1d0qA	103	77.64	g.41.3.2	45208
1bdo	80	80.53		
2hp4A	114	82.83		
2ol1A	147	83.26		
1i76A	163	84.48	d.92.1.11	61877
2pgbB	259	84.78		
2acfA	182	86.22	c.50.1.2	126547
1b5l	172	86.88		
3bbjA	272	86.96