# List of top-scoring protein chains for t06-w0.5-1-CB8-sep9-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1dunA	134	26.59	b.85.4.1	28371
2ol1A	147	27.72		
1t6lA	290	27.86	d.131.1.2,d.131.1.2	106574,106575
2p22D	79	30.31		
2fqxA	318	33.18		
2p9wA	334	41.61		
2jmkA	111	46.79		
2qsvA	220	48.58		
1widA	130	54.89	b.142.1.2	114667
2vokA	188	67.04		
2gpuA	230	68.15	a.123.1.1	135493
1hfcA	169	70.49	d.92.1.11	40335
1sraA	151	72.61	a.39.1.3	17190
1q5hA	147	75.23	b.85.4.1	95893
1os8A	223	76.14	b.47.1.1	93481
1f7dA	136	81.70	b.85.4.1	28353
2o6pA	161	86.88