# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2dduA	387	7.487		
2o3hA	285	8.697		
1b9dA	163	16.68	c.55.3.2	33649
1ztxE	108	17.33	b.1.18.4	125658
1yrkA	126	17.80		
3bfxA	296	22.21		
1aquA	297	27.91	c.37.1.5	31942
1g3mA	294	32.00	c.37.1.5	83268
2hbtA	247	32.32		
2i53A	258	32.50		
2ns2A	242	33.79		
1m8uA	173	33.85	b.11.1.1,b.11.1.1	91233,91234
1s0aA	429	35.62	c.67.1.4	98263
2v24A	208	39.22		
2p9mA	138	40.86		
2g19A	244	52.09		
2b5iB	214	53.09	b.1.2.1,b.1.2.1	127896,127897
1m2oB	190	54.28	c.37.1.8	78485
2h3bA	494	56.49		
2odiA	238	56.49		
2pwwA	127	58.38		
2pgcA	207	59.20		
1gsjA	258	63.27	c.73.1.2	70397
1ei5A	520	65.29	b.61.3.1,b.61.3.1,e.3.1.1	27418,27419,42772
1fvnA	37	65.55	j.6.1.1	46096
1j99A	293	67.90	c.37.1.5	71618
2hkjA	469	70.98	a.156.1.3,d.14.1.3,d.122.1.2	136553,136554,136555
2glzA	153	71.07	d.81.3.1	135348
1wchA	315	74.26	c.45.1.2	114508
1qhhA	167	75.33	c.37.1.19	32393
1hyvA	166	77.72	c.55.3.2	61424
1xo8A	151	79.14	b.1.25.1	115698
1ds1A	324	79.34	b.82.2.2	28127
487dH	224	82.94	i.1.1.2	45835
1f02T	66	82.97	j.67.1.1	46360
2h1zA	39	87.42		
2pulA	397	88.96