# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1v47A	349	5.805	b.122.1.3,c.26.1.5	100292,100293
2odiA	238	10.18		
1dgwX	79	18.42	b.82.1.2	28091
1q98A	165	24.52	c.47.1.10	96253
1gs5A	258	28.22	c.73.1.2	70395
2q0oA	236	32.69		
2oaaA	249	41.52		
2yzhA	171	44.92		
2euiA	153	52.06	d.108.1.1	132387
2iu1A	208	56.51		
2yqcA	486	57.89		
2q7nA	488	58.26		
1ys5A	164	64.49	f.4.1.3	123956
2cx4A	164	65.25	c.47.1.10	130973
1x9pA	523	65.32		
1e0tA	470	65.45	b.58.1.1,c.1.12.1,c.49.1.1	27064,29292,33146
1i52A	236	67.25	c.68.1.13	61767
1wi5A	119	69.37	b.40.4.5	114661
1x4pA	66	70.51		
2q8oA	136	74.11		
2bskB	90	74.21	g.83.1.1	129091
1t06A	235	82.20	a.118.1.17	106194
1zq7A	207	85.23	d.309.1.1	125501
1bowA	159	88.93	d.60.1.1	39528