# List of top-scoring protein chains for t06-w0.5-1-n_sep-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2odiA	238	0.2656		
1v47A	349	1.985	b.122.1.3,c.26.1.5	100292,100293
1q98A	165	5.246	c.47.1.10	96253
2ywiA	196	11.47		
1dgwX	79	11.86	b.82.1.2	28091
2p9wA	334	12.27		
2q7nA	488	13.91		
1wy2A	351	17.20		
1fxoA	293	18.13	c.68.1.6	34524
2cx4A	164	18.43	c.47.1.10	130973
1h5rA	293	19.90	c.68.1.6	65623
2nnwA	376	21.11		
1i52A	236	21.73	c.68.1.13	61767
1lvwA	295	22.44	c.68.1.6	84723
1jyoA	130	23.70	d.198.1.1	67483
1v74A	107	24.94	d.243.1.1	100442
1vc4A	254	27.20	c.1.2.4	100557
1zxfA	155	27.35	d.129.3.5	125771
2ijzA	428	28.33		
2cirA	297	28.83		
2e4qA	109	30.35		
1fqtA	112	33.38	b.33.1.1	24441
1xuvA	178	34.49	d.129.3.5	116069
1h7eA	245	34.61	c.68.1.13	60717
2yzhA	171	34.66		
2geyA	158	39.31		
1dpeA	507	41.28	c.94.1.1	35799
2a6qA	86	44.40	d.306.1.1	126293
1xvqA	175	50.53	c.47.1.10	116094
2nwfA	141	52.05		
3bk5A	237	52.21		
3c0dA	119	52.80		
1hkqA	132	53.21	a.4.5.10	83555
2f06A	144	55.95	d.58.18.11,d.58.18.11	132652,132653
1bowA	159	56.07	d.60.1.1	39528
1sqhA	312	57.59	d.108.1.5	98966
2yziA	138	57.80		
2i7fA	108	58.00		
1xm3A	264	62.96	c.1.31.1	115461
1jykA	254	64.63	c.68.1.13	67458
2r5xA	129	65.16		
2b3gA	123	68.63	b.40.4.3	127786
2zgyA	320	70.33		
2djwA	92	71.13		
2p7oA	133	79.66		
2j7qA	232	81.45		
2rl8A	154	83.21		
1xkpB	124	84.57	d.198.1.1	122087
2ia0A	171	84.95		
1nycA	111	85.53	b.61.2.2	92336
2v94A	107	87.23		
1cxqA	162	88.08	c.55.3.2	33621
1f02T	66	89.54	j.67.1.1	46360