This file specifies which residues will be varied Column 2: Chain Column 4-7: sequential residue number Column 9-12: pdb residue number Column 14-18: id (described below) Column 21-40: amino acids to be used NATAA => use native amino acid ALLAA => all amino acids NATRO => native amino acid and rotamer PIKAA => select inividual amino acids POLAR => polar amino acids APOLA => apolar amino acids The following demo lines are in the proper format A 1 3 NATAA A 2 4 ALLAA A 3 6 NATRO A 4 7 NATAA B 5 1 PIKAA DFLM B 6 2 PIKAA HIL B 7 3 POLAR ------------------------------------------------- start A 1 161 NATAA Y A 2 162 NATAA D A 3 163 NATAA A A 4 164 NATAA D A 5 165 NATAA S A 6 166 NATAA E A 7 167 NATAA Q A 8 168 NATAA R A 9 169 NATAA K A 10 170 NATAA S A 11 171 NATAA L A 12 172 NATAA H A 13 173 NATAA L A 14 174 NATAA A A 15 175 NATAA A A 16 176 NATAA V A 17 177 NATAA F A 18 178 NATAA T A 19 179 NATRO C A 20 180 NATAA N A 21 181 NATAA F A 22 182 NATAA T A 23 183 NATAA N A 24 184 NATAA H A 25 185 NATAA M A 26 186 NATAA Y A 27 187 NATAA A A 28 188 NATAA L A 29 189 NATAA A A 30 190 NATAA A A 31 191 NATAA E A 32 192 NATAA L A 33 193 NATAA L A 34 194 NATAA K A 35 195 NATAA K A 36 196 NATAA Y A 37 197 NATAA N A 38 198 NATAA L A 39 199 NATRO P A 40 200 NATAA F A 41 201 NATAA D A 42 202 NATAA V A 43 203 NATAA M A 44 204 NATAA L A 45 205 NATRO P A 46 206 NATAA L A 47 207 NATAA I A 48 208 NATAA D A 49 209 NATAA E A 50 210 NATAA T A 51 211 NATAA A A 52 212 NATAA R A 53 213 NATAA K A 54 214 NATAA V A 55 215 NATAA H A 56 216 NATAA E A 57 217 NATAA L A 58 218 NATAA E A 59 219 NATRO P A 60 220 NATAA K A 61 221 NATAA T A 62 222 NATAA A A 63 223 NATAA Q A 64 224 NATAA T A 65 225 NATAA G A 66 226 NATRO P A 67 227 NATAA A A 68 228 NATAA I A 69 229 NATAA R A 70 230 NATAA Y A 71 231 NATAA D A 72 232 NATAA E A 73 233 NATAA N A 74 234 NATAA V A 75 235 NATAA I A 76 236 NATAA G A 77 237 NATAA N A 78 238 NATAA H A 79 239 NATAA L A 80 240 NATAA R A 81 241 NATAA M A 82 242 NATAA L A 83 243 NATAA A A 84 244 NATAA D A 85 245 NATAA D A 86 246 NATRO P A 87 247 NATAA A A 88 248 NATAA M A 89 249 NATAA Q A 90 250 NATAA R A 91 251 NATAA L A 92 252 NATAA Y A 93 253 NATAA E A 94 254 NATAA L A 95 255 NATAA L A 96 256 NATAA S A 97 257 NATAA R A 98 258 NATAA S A 99 259 NATAA I A 100 260 NATAA H A 101 261 NATAA E A 102 262 NATAA R A 103 263 NATAA Q