Best Alignments for T0295

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zq9A/T0295-1zq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq9A/T0295-1zq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1654e-225.96e-98
1qyrA/T0295-1qyrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qyrA/T0295-1qyrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9658e-208.32e-92 c.66.1.24
1xxlA/T0295-1xxlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxlA/T0295-1xxlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5014e-151.76e-67
1wznA/T0295-1wznA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wznA/T0295-1wznA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3672e-142.03e-62
1vl5A/T0295-1vl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl5A/T0295-1vl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0931e-144.99e-62 c.66.1.41
1ve3A/T0295-1ve3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ve3A/T0295-1ve3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0775e-133.06e-57
1jg1A/T0295-1jg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jg1A/T0295-1jg1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1185e-135.68e-60 c.66.1.7
1dl5A/T0295-1dl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dl5A/T0295-1dl5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7076e-131.69e-58 1dl5A c.66.1.7
d.197.1.1
1l3iA/T0295-1l3iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l3iA/T0295-1l3iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7201e-136.12e-53 c.66.1.22
1uwvA/T0295-1uwvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uwvA/T0295-1uwvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2247e-121.35e-52 b.40.4.12
c.66.1.40

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001