# List of top-scoring protein chains for t2k-100-30-CB_burial_14_7 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
1iujA	106	1.45e-01		unknown_sccs	-9953
1iw0A	215	5.22e-01		a.132.1.1	83720
1lq9A	112	5.31e-01		d.58.4.3	78129
2scuB	388	3.53e+00	2scuB	c.23.4.1	31141
				d.142.1.4	41562
1v88A	130	4.48e+00			
1cvjA	190	6.89e+00	1cvjB	d.58.7.1	39191
				d.58.7.1	39192
1n81A	186	9.72e+00		a.185.1.1	85388
1fjcA	96	1.23e+01	1fjcA	d.58.7.1	39212
1fjeB	175	1.31e+01	1fj7A	d.58.7.1	39210
				d.58.7.1	39211
1g73A	162	1.32e+01	1fewA	a.7.4.1	16332
1jbaA	204	1.43e+01	1rec	a.39.1.5	17330
1atiA	505	1.68e+01	1atiA	c.51.1.1	33196
				d.104.1.1	40745
1bix	287	1.71e+01	1bix	d.151.1.1	41781
1hqvA	191	1.75e+01	1hqvA	a.39.1.8	61160
1e44B	96	1.82e+01	1e44B	b.101.1.1	59220
1atiB	505	2.10e+01	1atiA	c.51.1.1	33197
				d.104.1.1	40746
1gsoA	431	2.59e+01	1gsoA	b.84.2.1	28240
				c.30.1.1	31647
				d.142.1.2	41492
1qg3A	195	2.63e+01	1qg3A	b.1.2.1	21993
				b.1.2.1	21994
1moh	142	2.73e+01	1flp	a.1.1.2	15012
1d02A	202	2.95e+01	1d02A	c.52.1.8	33313
1flp	142	3.13e+01	1flp	a.1.1.2	15011
1rm8A	169	3.26e+01		d.92.1.11	-10584
1jjoC	261	3.52e+01			
1whtB	153	3.86e+01	1whtB		
1pv9A	348	3.87e+01		c.55.2.1	-7610
				d.127.1.1	-11000
1hwxA	501	3.99e+01	1hwyA	c.2.1.7	30250
				c.58.1.1	33898