# List of top-scoring protein chains for t04-100-30-CB_burial_14_7 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
1iujA	106	2.66e-01		unknown_sccs	-9953
1lq9A	112	3.48e-01		d.58.4.3	78129
1iw0A	215	3.85e+00		a.132.1.1	83720
1lst	239	7.83e+00	1lst	c.94.1.1	35755
1r3cA	366	8.32e+00		d.144.1.7	-11296
1b00A	127	9.12e+00	3chy	c.23.1.1	31122
1jj2V	154	1.05e+01	1ffkT	d.59.1.1	63107
1k28D	391	1.12e+01		b.106.1.1	68052
				b.106.1.1	68053
1s72W	154	1.17e+01			
1lvmA	229	1.37e+01		b.47.1.3	78243
1edt	271	1.52e+01	2ebn	c.1.8.5	28993
3fapB	94	1.65e+01	1nsgB	a.24.7.1	16612
1who	96	1.79e+01	1who	b.7.3.1	23215
1ef1A	294	2.08e+01	1ef1A	a.11.2.1	16368
				b.55.1.5	27003
				d.15.1.4	37611
1azwA	313	2.15e+01	1qtrA	c.69.1.7	34658
1fjgI	128	2.22e+01	1fjfI	d.14.1.1	37559
1fjgQ	105	2.31e+01	1fjfQ	b.40.4.5	25352
1ntyA	311	3.64e+01			
1jv2B	692	3.94e+01		b.1.15.1	67338
				c.62.1.1	67339
				d.200.1.1	67340
				g.3.11.6	67341
				g.3.11.6	67342