Best Alignments for T0256

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1lkdA/T0256-1lkdA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lkdA/T0256-1lkdA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9556e-153.9510e-21 d.32.1.3
1nkiA/T0256-1nkiA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1nkiA/T0256-1nkiA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.6753e-151.2728e-19 d.32.1.2
1lgtA/T0256-1lgtA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lgtA/T0256-1lgtA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.3876e-142.5237e-20 d.32.1.3
1lqpA/T0256-1lqpA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lqpA/T0256-1lqpA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.6518e-148.2140e-19 d.32.1.2
1han/T0256-1han-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1han/T0256-1han-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.6667e-148.5357e-20 1han d.32.1.3
1kw3B/T0256-1kw3B-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1kw3B/T0256-1kw3B-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2547e-131.0246e-18 d.32.1.3
1gdgA/T0256-1gdgA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gdgA/T0256-1gdgA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6688e-121.2523e-17
1f9zA/T0256-1f9zA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1f9zA/T0256-1f9zA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9005e-121.2107e-18 1qipA d.32.1.1
1f1uA/T0256-1f1uA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1f1uA/T0256-1f1uA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.2168e-123.6893e-17 d.32.1.3
1f1xA/T0256-1f1xA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1f1xA/T0256-1f1xA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.6760e-126.3527e-17 d.32.1.3
1mpyA/T0256-1mpyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1mpyA/T0256-1mpyA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.8662e-125.1891e-17 1mpyA d.32.1.3
1r9cA/T0256-1r9cA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1r9cA/T0256-1r9cA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.7906e-118.2942e-24 d.32.1.2
1kllA/T0256-1kllA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1kllA/T0256-1kllA-t04-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 7.3276e-101.4336e-23 d.32.1.2
1ecsA/T0256-1ecsA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1ecsA/T0256-1ecsA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 3.9460e-093.7781e-24 1ecsA d.32.1.2
1jc4A/T0256-1jc4A-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1jc4A/T0256-1jc4A-t2k-local-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.5996e-081.4278e-19 1jc4A d.32.1.4
1qtoA/T0256-1qtoA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.a2m 1qtoA/T0256-1qtoA-t2k-global-str2+CB_burial_14_7-2.2+1.8-adpstyle5.al 1.7191e-061.3320e-20 1bylA d.32.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001