Best Alignments for T0243

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jgsA/T0243-1jgsA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jgsA/T0243-1jgsA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.1437e+001.1927e+00 a.4.5.28
1lnwA/T0243-1lnwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lnwA/T0243-1lnwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0168e+018.2014e+00 a.4.5.28
1hmjA/T0243-1hmjA-t2k-global-adpstyle5.a2m 1hmjA/T0243-1hmjA-t2k-global-adpstyle5.al 1.0285e+012.2951e+00 d.78.1.1
1b4m/1hmt-T0243-fssp-local-adpstyle5.a2m 1b4m/1hmt-T0243-fssp-local-adpstyle5.al 1.0338e+013.6576e+00 1hmt b.60.1.2
1s3jA/T0243-1s3jA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1s3jA/T0243-1s3jA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3194e+015.0843e+00 a.4.5.28
1fzpB/T0243-1fzpB-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fzpB/T0243-1fzpB-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.0132e+015.4357e+01
1hssA/T0243-1hssA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hssA/T0243-1hssA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.0456e+016.0057e+00 1bea a.52.1.2
1ub9A/T0243-1ub9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ub9A/T0243-1ub9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.1632e+011.7415e+01 a.4.5.28
1suvE/T0243-1suvE-t2k-local-adpstyle5.a2m 1suvE/T0243-1suvE-t2k-local-adpstyle5.al 2.6573e+012.9681e+01 unknown_sccs
1jf8A/T0243-1jf8A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1jf8A/T0243-1jf8A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.7935e+019.5431e+00 c.44.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001