Best Alignments for T0240

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ihrA/T0240-1ihrA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ihrA/T0240-1ihrA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.3442e-127.5803e-14 1ihrA d.212.1.2
1lr0A/T0240-1lr0A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1lr0A/T0240-1lr0A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.2425e-056.0279e-08 d.212.1.1
1gt1A/T0240-1gt1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gt1A/T0240-1gt1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.8948e+001.7809e+00 b.60.1.1
1obpA/T0240-1obpA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1obpA/T0240-1obpA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.2355e+001.8371e+00 1obpA b.60.1.1
1hn2A/T0240-1hn2A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hn2A/T0240-1hn2A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.9067e+002.1599e+00 b.60.1.1
1tolA/1g3p-T0240-fssp-local-adpstyle5.a2m 1tolA/1g3p-T0240-fssp-local-adpstyle5.al 7.1253e+002.9567e+00 1g3p b.37.1.1
d.212.1.1
1ospO/T0240-1ospO-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ospO/T0240-1ospO-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.1200e+007.7025e-01 1ospO b.76.1.1
1n8jA/T0240-1n8jA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1n8jA/T0240-1n8jA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.4216e+011.7135e+00 c.47.1.10
1aisA/T0240-1aisA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1aisA/T0240-1aisA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6716e+011.3331e+00 1ytbA d.129.1.1
1ri6A/T0240-1ri6A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ri6A/T0240-1ri6A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.0479e+014.1606e+00 unknown_sccs

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001