Best Alignments for T0230

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1pa4A/T0230-1pa4A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1pa4A/T0230-1pa4A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.3556e+003.7278e-01 d.52.7.1
1osdA/T0230-1osdA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1osdA/T0230-1osdA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.8207e+007.1981e-01
1afi/T0230-1afi-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1afi/T0230-1afi-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.6019e+002.1145e+00 1aw0 d.58.17.1
2acu/1frb-T0230-fssp-local-adpstyle5.a2m 2acu/1frb-T0230-fssp-local-adpstyle5.al 6.4578e+002.0964e+00 1frb c.1.7.1
1josA/T0230-1josA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1josA/T0230-1josA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.5853e+006.3415e-01 d.52.7.1
1hw8A/T0230-1hw8A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1hw8A/T0230-1hw8A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.3749e+008.3439e-01 1dqaA d.179.1.1
d.58.20.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001