# List of top-scoring protein chains for t04-100-30-CB_burial_14_7 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
1c7qA	445	2.14e-30	2pgi	c.80.1.2	35307
1iatA	557	1.39e-02	1dqrA	c.80.1.2	62123
1jeoA	180	6.67e-01		c.80.1.3	66611
1eziA	228	7.97e-01	1eyrA	c.68.1.13	34512
1ct5A	256	4.17e+00	1ct5A	c.1.6.2	28663
1vimA	200	4.52e+00		c.80.1.3	-8532
1bif	469	5.08e+00	1bif	c.37.1.7	31961
				c.60.1.4	34003
1rypD	241	6.08e+00	1rypD	d.153.1.4	41935
1q16A	1247	6.12e+00		b.52.2.2	-4337
				c.81.1.1	-8547
1fnd	314	6.96e+00	1fnc	b.43.4.2	25626
				c.25.1.1	31516
1zymA	258	7.27e+00	1zymA	a.60.10.1	18110
				c.8.1.2	30705
1fnc	314	7.98e+00	1fnc	b.43.4.2	25627
				c.25.1.1	31517
1j5xA	342	1.15e+01		c.80.1.1	71591
1vhqA	232	1.23e+01		c.23.16.2	-6514
1qh8B	519	1.27e+01	1qguB	c.92.2.3	35634
1hnuA	280	1.29e+01	1hnoA	c.14.1.3	61096
1b5tA	275	1.32e+01	1b5tA	c.1.23.1	29676
1uocA	289	1.34e+01		unknown_sccs	-7671
1ryp2	233	1.41e+01	1ryp2		
1qhtA	775	1.49e+01	1tgoA	c.55.3.5	33722
				e.8.1.1	43011
1a4iA	301	1.56e+01	1a4iA	c.2.1.7	30278
				c.58.1.2	33926
1jk7A	323	1.66e+01	1auiA	d.159.1.3	63144
1l3iA	192	1.69e+01		c.66.1.22	77676
1qqfA	277	1.86e+01	1c3d	a.102.4.4	18875
1bt3A	345	1.99e+01	1bt3A	a.86.1.2	18507
7odcA	424	2.06e+01	7odcA	b.49.2.3	26488
				c.1.6.1	28650
1q15A	503	2.08e+01		c.26.2.1	-6625
				d.153.1.1	-11400
1ho8A	480	2.10e+01	1ho8A	a.118.1.9	61107
1clc	639	2.27e+01	1clc	a.102.1.2	18835
				b.1.18.2	21872
1fwkA	296	2.30e+01	1fwkA	d.14.1.5	37576
				d.58.26.1	39398
1dbtA	239	2.33e+01	1dbtA	c.1.2.3	28539
1qj5A	429	2.44e+01	1dtyA	c.67.1.4	34493
1eg5A	384	2.50e+01	1ecxA	c.67.1.3	34429
1gnd	447	2.65e+01	1gnd	c.3.1.3	30423
				d.16.1.6	37987
1fjmA	330	2.66e+01	1auiA	d.159.1.3	42082
1s72O	116	2.75e+01			
1aop	497	2.85e+01	2aop	d.58.36.1	39501
				d.58.36.1	39502
				d.134.1.1	41425
				d.134.1.1	41426
1b65A	375	2.86e+01	1b65A	d.154.1.1	42020
1pz1A	333	2.87e+01		c.1.7.1	-5255
1jy1A	464	2.98e+01		d.136.1.3	67438
				d.136.1.3	67439
1h72C	296	3.09e+01		d.14.1.5	60712
				d.58.26.1	60713
1l1lA	739	3.09e+01		c.7.1.4	73470
1s0aA	429	3.13e+01		c.67.1.4	-8201
1hyeA	313	3.17e+01	2cmd	c.2.1.5	61400
				d.162.1.1	61401
1t9kA	347	3.19e+01			
1jflA	228	3.34e+01		c.78.2.1	71656
				c.78.2.1	71657
1brmA	367	3.36e+01	1brmA	c.2.1.3	30030
				d.81.1.1	39945
1o5hA	214	3.50e+01		unknown_sccs	-1078
1sxjE	354	3.56e+01			
1rqpA	299	3.68e+01		unknown_sccs	-4411
				unknown_sccs	-7908
1f0jA	377	3.78e+01	1f0jA	a.125.1.1	19346
1vhvA	268	3.84e+01		c.90.1.1	-8619
1moq	368	3.85e+01	1moq	c.80.1.1	35302
1pjhA	280	3.92e+01		c.14.1.3	-6229