Best Alignments for T0217

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1oltA/T0217-1oltA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1oltA/T0217-1oltA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.3976e-022.2404e-04 unknown_sccs
1k1xA/T0217-1k1xA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1k1xA/T0217-1k1xA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9655e-011.8872e-03 c.6.2.2
b.30.5.8
a.8.3.2
1qwgA/T0217-1qwgA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1qwgA/T0217-1qwgA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.0598e-011.6733e-04 unknown_sccs
1ii7A/T0217-1ii7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ii7A/T0217-1ii7A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.0260e-011.1020e-03 1ii7A d.159.1.4
1j96A/T0217-1j96A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1j96A/T0217-1j96A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.5430e-019.2055e-04 c.1.7.1
1k8cA/T0217-1k8cA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1k8cA/T0217-1k8cA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.8642e-012.9143e-03 c.1.7.1
1frb/T0217-1frb-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1frb/T0217-1frb-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.9496e-012.2949e-03 1frb c.1.7.1
1ad1A/T0217-1ad1A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1ad1A/T0217-1ad1A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.8974e-015.1678e-03 1aj2 c.1.21.1
1mi3A/T0217-1mi3A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1mi3A/T0217-1mi3A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.1040e-015.7353e-03 c.1.7.1
1pz1A/T0217-1pz1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1pz1A/T0217-1pz1A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.6161e-011.2373e-03 c.1.7.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001