Best Alignments for T0216

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1emsA/T0216-1emsA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1emsA/T0216-1emsA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.3662e+005.3354e-01 1emsA d.13.1.1
d.160.1.1
1vjzA/T0216-1vjzA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1vjzA/T0216-1vjzA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.4378e+003.2751e-01 c.1.8.3
1e19A/T0216-1e19A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1e19A/T0216-1e19A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 3.9161e+001.9686e-01 1b7bA c.73.1.1
1n99A/T0216-1n99A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1n99A/T0216-1n99A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 4.1956e+003.1405e-01 b.36.1.1
1p9rA/T0216-1p9rA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1p9rA/T0216-1p9rA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.3229e+001.7598e-01 c.37.1.11
1bdg/T0216-1bdg-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1bdg/T0216-1bdg-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.2612e+001.0299e-01 1qhaA c.55.1.3
1914/T0216-1914-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1914/T0216-1914-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.0227e+003.7930e-01 1914 d.49.1.1
1bwr/1wab-T0216-fssp-local-adpstyle5.a2m 1bwr/1wab-T0216-fssp-local-adpstyle5.al 8.4036e+003.0869e+00 1wab c.23.10.3
1q5qA/T0216-1q5qA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1q5qA/T0216-1q5qA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.5607e+007.5936e-01 d.153.1.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001