Best Alignments for T0214

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1t62A/T0214-1t62A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1t62A/T0214-1t62A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.9003e-026.6582e-04
1jn3A/1bpyA-T0214-fssp-local-adpstyle5.a2m 1jn3A/1bpyA-T0214-fssp-local-adpstyle5.al 4.7724e+001.9629e+00 1bpyA a.60.12.1
d.218.1.2
1dm9A/T0214-1dm9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1dm9A/T0214-1dm9A-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.6444e+001.0259e+00 1dm9A d.66.1.3
1khiA/T0214-1khiA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1khiA/T0214-1khiA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 9.8524e+002.7061e+00 b.40.4.5
b.34.5.2
1huzA/1bpyA-T0214-fssp-local-adpstyle5.a2m 1huzA/1bpyA-T0214-fssp-local-adpstyle5.al 1.0039e+013.6477e+00 1bpyA a.60.12.1
a.60.6.1
d.218.1.2
1bpe/1bpyA-T0214-fssp-local-adpstyle5.a2m 1bpe/1bpyA-T0214-fssp-local-adpstyle5.al 1.0198e+013.6958e+00 1bpyA a.60.12.1
a.60.6.1
d.218.1.2
1gmuA/T0214-1gmuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gmuA/T0214-1gmuA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.6760e+015.1616e+00 d.58.38.1
b.107.1.1
1fjgQ/T0214-1fjgQ-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1fjgQ/T0214-1fjgQ-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9322e+018.4894e-01 1fjfQ b.40.4.5
1gmwA/T0214-1gmwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gmwA/T0214-1gmwA-t2k-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.9849e+016.5359e+00 d.58.38.1
b.107.1.1
1oxkA/T0214-1oxkA-t2k-local-adpstyle1.a2m 1oxkA/T0214-1oxkA-t2k-local-adpstyle1.al 2.2578e+012.2531e+01 a.24.10.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001