# List of top-scoring protein chains for t04-100-30-CB_burial_14_7 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
1t62A	166	4.32e-02			
3fruA	269	7.70e-01	1agdA	b.1.1.2	20657
				d.19.1.1	38150
3tmkA	216	3.34e+00	3tmkA	c.37.1.1	31920
1lkkA	105	3.71e+00	1lckA	d.93.1.1	40412
1a62	130	1.25e+01	1a62	a.140.3.1	64708
				b.40.4.5	64709
1at0	145	1.28e+01	1at0	b.86.1.1	28374
1jyaA	130	1.37e+01		d.198.1.1	67453
1bc8C	93	1.40e+01	1awcA	a.4.5.21	16168
1euvB	86	1.80e+01	1a5r	d.15.1.1	37598
1dptA	117	1.94e+01	1dptA	d.80.1.3	39862
1ov3A	138	2.21e+01		b.34.2.1	87451
				b.34.2.1	87452
1olzA	663	2.53e+01		b.1.1.4	-2678
				unknown_sccs	-4626
				unknown_sccs	-12590
1k5nA	276	2.90e+01		b.1.1.2	77266
				d.19.1.1	77267
1l6oA	95	3.09e+01		b.36.1.1	84534
1d9cA	121	3.11e+01	1d9cA	a.26.1.3	16901
1sw6A	327	3.17e+01	1sw6A	d.211.1.1	19176
1a8i	842	3.27e+01	1a8i	c.87.1.4	35490
1djrD	103	3.53e+01	3chbD	b.40.2.1	24865
1utiA	58	3.85e+01		b.34.2.1	-3552