# List of top-scoring protein chains for t04-100-30-CB_burial_14_7 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
1lmeA	176	4.80e+00		d.167.1.1	84629
1hcl	298	8.23e+00	1hcl	d.144.1.7	41593
1j3mA	129	1.03e+01			
1o6yA	299	1.12e+01		d.144.1.7	81106
1cot	129	1.23e+01	1ycc	a.3.1.1	15899
1oq1A	223	1.53e+01		unknown_sccs	-3455
1qf8A	182	1.56e+01	1qf8A	g.41.4.1	45212
1gz8A	299	1.88e+01		d.144.1.7	83405
1a8i	842	1.93e+01	1a8i	c.87.1.4	35490
1mwqA	101	2.01e+01		unknown_sccs	-9962
1o6lA	337	2.13e+01		d.144.1.7	81092
1q8yA	373	2.16e+01		d.144.1.7	-11319
1a4yA	460	3.01e+01	1a4yA	c.10.1.1	30852
1puzA	82	3.23e+01			
1mq4A	272	3.43e+01		d.144.1.7	-11349
1forL	210	3.44e+01	8fabA	b.1.1.1	19988
				b.1.1.2	21044
1h5uA	842	3.53e+01	1a8i	c.87.1.4	60655
1mveA	243	3.62e+01		b.29.1.2	85140
1howA	373	3.72e+01	1hcl	d.144.1.7	41679
1phk	298	3.72e+01	1cdkA	d.144.1.7	41635