Best Alignments for T0208

To select the top models, SAM_T02 generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i60A/T0208-1i60A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1i60A/T0208-1i60A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.1085e-091.3906e-17 c.1.15.4
1k77A/T0208-1k77A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1k77A/T0208-1k77A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 6.3389e-041.1396e-10 c.1.15.5
1gw9A/T0208-1gw9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1gw9A/T0208-1gw9A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 5.3252e-031.8736e-09 c.1.15.3
1mnzA/T0208-1mnzA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1mnzA/T0208-1mnzA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 7.7175e-033.4748e-09 c.1.15.3
1muwA/T0208-1muwA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1muwA/T0208-1muwA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.0057e-023.1623e-09 c.1.15.3
1xis/T0208-1xis-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1xis/T0208-1xis-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3354e-027.3492e-09 4xis c.1.15.3
1qtwA/T0208-1qtwA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1qtwA/T0208-1qtwA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 2.5743e-011.2959e-07 1qumA c.1.15.1
1a0cA/T0208-1a0cA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1a0cA/T0208-1a0cA-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 8.0643e-013.9478e-06 1a0cA c.1.15.3
1de5A/T0208-1de5A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.a2m 1de5A/T0208-1de5A-t04-local-str2+CB_burial_14_7-0.4+0.4-adpstyle5.al 1.3002e+014.3838e-04 1de5A c.1.15.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001