SetCost wet6.5 3 near_backbone 3 way_back 3 dry5 5 dry6.5 6 dry8 5 dry12 2 \
	sidechain 6 \
	bystroff 5 \
	soft_clashes 10  backbone_clashes 2 \
	break 20  \
	pred_alpha2 5 \
	constraints 20 \
	hbond_geom 0.1 \
	hbond_geom_backbone 0.1 \
	hbond_geom_beta 0.4 \
	hbond_geom_beta_pair 1 \
	phobic_fit 2 


// Add the following for extra-cellular proteins:
#	known_ssbond 0.5	# and put ssbond command in constraints file
#	maybe_ssbond 0.5

// For comparative modeling, increase weight of break and hbond_geom...

// put any constraints here, such as helix constraints, strand constraints,
//	ssbond, hbond, or just arbitrary pairs of atoms.

# from T0206.t2k.str2.constraints
StrandConstraint	V110	S112	0.822	bonus	#s1
StrandConstraint	I118	S119	0.626	bonus	#s2
StrandConstraint	T125	S129	0.792	bonus	#s3
StrandConstraint	F133	N141	0.849	bonus	#s4
StrandConstraint	V147	V155	0.675	bonus	#s5
StrandConstraint	P159	G162	0.713	bonus	#s6
StrandConstraint	S187	I192	0.848	bonus	#s8
StrandConstraint	G197	L202	0.818	bonus	#s9
HelixConstraint 	V213	H216	0.616	bonus

StrandConstraint	Q181	T184	0.4  	bonus	#s7 - possible

# from looking at wholestruct_alignModel1_try1_superpose.pdb
SheetConstraint		N91  G93 	G111 T109	2
SheetConstraint		I153 L148	G197 L202	2
SheetConstraint 	I139 G132	T185 I192	2
SheetConstraint		L198 G197	T125 F126	hbondG197 	1
SheetConstraint		A201 L202	P104 D103	hbondL202 	1
SheetConstraint		I182 T183	V147 S146	hbondV147 	1