#From whole-chain try3.costfcn

SetCost wet6.5 3 near_backbone 3 way_back 3 dry5 5 dry6.5 6 dry8 5 dry12 2 \
	sidechain 6 \
	bystroff 5 \
	soft_clashes 10  backbone_clashes 2 \
	break 20  \
	pred_alpha2 5 \
	constraints 20 \
	hbond_geom 0.1 \
	hbond_geom_backbone 0.1 \
	hbond_geom_beta 0.4 \
	hbond_geom_beta_pair 1 \
	phobic_fit 2 


// Add the following for extra-cellular proteins:
#	known_ssbond 0.5	# and put ssbond command in constraints file
#	maybe_ssbond 0.5

// For comparative modeling, increase weight of break and hbond_geom...

// put any constraints here, such as helix constraints, strand constraints,
//	ssbond, hbond, or just arbitrary pairs of atoms.


//removed due to redundancy
# from T0206.t2k.dssp-ehl2.constraints
#StrandConstraint	V110	S112	0.668
#StrandConstraint	T125	S129	0.6488
#StrandConstraint	F133	T142	0.6091 //or is it F133-N141, as below?
#StrandConstraint	V147	V155	0.6331
#StrandConstraint	P159	G162	0.6518
#StrandConstraint	S187	I192	0.662
#StrandConstraint	G197	L202	0.7972
#HelixConstraint 	I208	H216	0.62

# from T0206.t2k.str2.constraints
StrandConstraint	V110	S112	0.822
StrandConstraint	I118	S119	0.626
StrandConstraint	T125	S129	0.792
StrandConstraint	F133	N141	0.849
StrandConstraint	V147	V155	0.675
StrandConstraint	P159	G162	0.713
StrandConstraint	S187	I192	0.848
StrandConstraint	G197	L202	0.818
HelixConstraint 	V213	H216	0.616