Eptesicus fuscus tRNA Activity Predictions

These data were created using the tRAP pipeline detailed in the manuscript Predicting transfer RNA gene activity from sequence and genome context.

Column Explanations:
tRNA Name: The name of the tRNA gene as you would find in GtRNAdb or after running tRNAscan-SE.
Prediction: Whether the tRNA gene is predicted as active in at least one tissue or inactive by tRAP.
Probability: The probability score output by tRAP to inform the prediction. Scores are negative if predicted as inactive. Closer to 1.0 or -1.0 indicates a stronger prediction.
tRNA Genes With Same Anticodon: The total number of tRNA genes in the genome that have the same anticodon as this tRNA gene.
Minimum Free Energy: Minimum Free Energy of the tRNA gene as predicted by RNAfold using the secondary structure output by tRNAscan-SE.
tRNAscan-SE Bit Score: The general bit score for this tRNA gene output by tRNAscan-SE.
tRNA phyloP Score: Average phyloP score in 29-way placental mammal alignment across the tRNA gene sequence.
PolyT Distance: Distance to the nearest TTTT transcription termination sequence 3' of the tRNA gene.
CpG Density: Number of observed CpG dinucleotides divided by total nucleotides for the region spanning from 350 nt 5' to 350 nt 3' of the tRNA gene.
CpG Islands Score: Number of observed CpG dinucleotides divided by the product of the observed C and the observed G nts for the region spanning from 350 nt 5' of the tRNA gene to 1 nt 5' of the tRNA gene.
5' Flank phyloP Score: Average phyloP score in 29-way placental mammal alignment across the 20 nt directly 5' of the tRNA gene sequence.
tRNA Genes Within 10 Kb: Number of other tRNA genes within 10,000 nt in either direction of the tRNA gene.
Exons Within 75 Kb: Number of exons within 75,000 nt in either direction of the tRNA gene.

tRNA Name	Prediction	Probability	Isotype & Anticodon	Chromosome	Start	End	Strand	tRNA Genes With Same Anticodon	Minimum Free Energy	tRNAscan-SE Bit Score	tRNA phyloP Score	PolyT Distance	CpG Density	CpG Islands Score	5' Flank phyloP Score	tRNA Genes Within 10 Kb	Exons Within 75 Kb
NW_007370710.1.tRNA243-AlaAGC	active	0.976	Ala-AGC	NW_007370710.1	8510379	8510452	-	8	-32	59.7	1.351	1	0.034	0.677	-1.577	3	10
NW_007370814.1.tRNA92-AlaAGC	active	0.969	Ala-AGC	NW_007370814.1	2577147	2577219	+	8	-31.9	84.7	0.753	18	0.066	0.915	-4.780	0	4
NW_007371001.1.tRNA19-AlaAGC	active	0.966	Ala-AGC	NW_007371001.1	365691	365764	+	8	-29.6	58.9	0.839	2	0.041	0.477	-3.375	7	42
NW_007370690.1.tRNA310-AlaAGC	active	0.959	Ala-AGC	NW_007370690.1	11192971	11193044	+	8	-29.6	58.9	0.579	8	0.065	0.813	-2.628	0	46
NW_007370657.1.tRNA1355-AlaAGC	active	0.946	Ala-AGC	NW_007370657.1	23943712	23943785	-	8	-32	59.7	1.345	5	0.065	0.429	-3.173	1	84
NW_007371097.1.tRNA4-AlaAGC	active	0.917	Ala-AGC	NW_007371097.1	76033	76105	-	8	-27	83.6	0.580	5	0.019	0.406	-4.462	0	5
NW_007371001.1.tRNA15-AlaAGC	active	0.853	Ala-AGC	NW_007371001.1	341776	341849	+	8	-28.1	59.6	0.024	2	0.044	0.754	-0.702	3	44
NW_007371001.1.tRNA16-AlaAGC	active	0.608	Ala-AGC	NW_007371001.1	342663	342736	+	8	-28.1	58.5	-1.132	1	0.021	0.536	-0.445	3	44
NW_007370658.1.tRNA866-AlaCGC	active	0.929	Ala-CGC	NW_007370658.1	27605600	27605672	-	3	-27.6	74.4	1.339	15	0.054	0.733	-2.927	1	9
NW_007371001.1.tRNA26-AlaCGC	active	0.85	Ala-CGC	NW_007371001.1	371047	371119	-	3	-26.5	79.7	1.172	6	0.019	0.364	-4.811	9	37
NW_007370678.1.tRNA962-AlaCGC	active	0.799	Ala-CGC	NW_007370678.1	2323582	2323654	-	3	-23.7	71.6	0.177	1	0.023	0.500	-0.393	0	16
NW_007370811.1.tRNA278-AlaTGC	active	0.947	Ala-TGC	NW_007370811.1	1348906	1348978	-	3	-26.5	79.7	1.056	6	0.043	0.455	-3.058	2	52
NW_007370847.1.tRNA144-AlaTGC	active	0.947	Ala-TGC	NW_007370847.1	600453	600525	-	3	-26.5	77.2	1.075	13	0.041	0.667	-4.291	2	37
NW_007370811.1.tRNA83-AlaTGC	active	0.926	Ala-TGC	NW_007370811.1	1353644	1353716	+	3	-26.5	78.7	0.648	5	0.071	0.885	-2.205	2	52
NW_007371001.1.tRNA24-ArgACG	active	0.987	Arg-ACG	NW_007371001.1	380940	381013	-	5	-25.4	67.6	1.048	15	0.061	0.819	-2.905	4	30
NW_007370654.1.tRNA821-ArgACG	active	0.981	Arg-ACG	NW_007370654.1	31138170	31138243	+	5	-23.1	64.2	1.233	10	0.080	1.049	-3.305	0	42
NW_007370710.1.tRNA188-ArgACG	active	0.976	Arg-ACG	NW_007370710.1	8511632	8511705	+	5	-23.7	64.6	0.500	3	0.085	0.972	-2.719	3	10
NW_007370840.1.tRNA69-ArgACG	active	0.953	Arg-ACG	NW_007370840.1	1285610	1285683	-	5	-25.4	67.6	1.345	61	0.038	0.857	-4.007	0	64
NW_007370691.1.tRNA986-ArgACG	active	0.865	Arg-ACG	NW_007370691.1	44231	44304	-	5	-25.4	67.6	0.701	50	0.023	0.625	-4.522	10	31
NW_007371348.1.tRNA1-ArgCCG	active	0.928	Arg-CCG	NW_007371348.1	4347	4420	-	2	-27.1	66	0.984	13	0.049	0.562	-5.974	0	16
NW_007370704.1.tRNA672-ArgCCG	active	0.924	Arg-CCG	NW_007370704.1	4744823	4744896	-	2	-29	64.9	1.341	12	0.050	0.848	0.093	0	35
NW_007370762.1.tRNA176-ArgCCT	active	0.987	Arg-CCT	NW_007370762.1	3771793	3771866	-	4	-32.1	72.3	1.030	8	0.053	0.616	-3.775	3	78
NW_007370762.1.tRNA160-ArgCCT	active	0.984	Arg-CCT	NW_007370762.1	3771268	3771341	+	4	-32.1	71.1	0.604	24	0.078	1.013	-3.581	3	78
NW_007370712.1.tRNA399-ArgCCT	active	0.978	Arg-CCT	NW_007370712.1	2318489	2318562	-	4	-27.2	65.6	1.347	7	0.061	1.325	-1.587	0	22
NW_007370762.1.tRNA177-ArgCCT	active	0.955	Arg-CCT	NW_007370762.1	3770251	3770324	-	4	-30.2	67.5	0.834	19	0.038	0.806	-0.647	3	78
NW_007370900.1.tRNA188-ArgTCG	active	0.984	Arg-TCG	NW_007370900.1	181291	181364	-	4	-29.2	74.8	1.202	17	0.105	0.909	-3.730	0	57
NW_007370691.1.tRNA983-ArgTCG	active	0.92	Arg-TCG	NW_007370691.1	56881	56954	-	4	-23.7	64.3	0.896	67	0.023	0.509	-6.312	7	32
NW_007370691.1.tRNA984-ArgTCG	active	0.883	Arg-TCG	NW_007370691.1	45960	46033	-	4	-23.7	65.5	0.552	43	0.038	0.643	-3.716	10	31
NW_007370762.1.tRNA159-ArgTCG	active	0.877	Arg-TCG	NW_007370762.1	3770800	3770873	+	4	-25.9	66.4	-0.191	1	0.075	0.616	-0.826	3	77
NW_007370701.1.tRNA17-ArgTCT	active	0.987	Arg-TCT	NW_007370701.1	596823	596910	+	4	-30.1	70.2	0.972	1	0.037	0.902	-3.200	4	34
NW_007370756.1.tRNA119-ArgTCT	active	0.973	Arg-TCT	NW_007370756.1	4321537	4321622	+	4	-30.7	71.1	1.372	5	0.099	0.974	0.430	0	28
NW_007370741.1.tRNA223-ArgTCT	active	0.945	Arg-TCT	NW_007370741.1	4179729	4179816	-	4	-25.6	70.8	1.240	1	0.041	0.542	-0.525	4	92
NW_007370750.1.tRNA154-ArgTCT	active	0.794	Arg-TCT	NW_007370750.1	4481193	4481267	+	4	-27.7	78.5	1.332	18	0.030	0.275	1.235	0	12
NW_007370743.1.tRNA307-AsnGTT	active	0.988	Asn-GTT	NW_007370743.1	4238163	4238237	-	9	-26.4	80.9	1.320	5	0.054	0.746	-2.429	0	69
NW_007370735.1.tRNA26-AsnGTT	active	0.987	Asn-GTT	NW_007370735.1	418179	418253	+	9	-26.4	80.9	0.985	9	0.094	0.773	-5.067	4	36
NW_007370713.1.tRNA233-AsnGTT	active	0.986	Asn-GTT	NW_007370713.1	4283296	4283370	+	9	-26.4	80.9	0.785	9	0.067	0.939	-2.490	0	40
NW_007370879.1.tRNA30-AsnGTT	active	0.986	Asn-GTT	NW_007370879.1	397800	397874	-	9	-26.4	80.9	1.012	10	0.058	0.665	-2.163	0	16
NW_007370700.1.tRNA255-AsnGTT	active	0.972	Asn-GTT	NW_007370700.1	7630453	7630527	-	9	-26.4	75.4	1.170	6	0.063	0.461	-3.986	0	0
NW_007370775.1.tRNA129-AsnGTT	active	0.948	Asn-GTT	NW_007370775.1	2598407	2598481	+	9	-26.4	80.9	?	103	0.056	0.680	?	0	22
NW_007370691.1.tRNA481-AsnGTT	active	0.882	Asn-GTT	NW_007370691.1	12847153	12847227	-	9	-26.4	80.9	?	183	0.057	0.755	?	1	38
NW_007370775.1.tRNA184-AsnGTT	active	0.882	Asn-GTT	NW_007370775.1	3675093	3675167	-	9	-26.4	80.9	?	181	0.034	1.030	?	0	41
NW_007370775.1.tRNA183-AsnGTT	active	0.881	Asn-GTT	NW_007370775.1	3708352	3708426	-	9	-26.4	80.9	?	180	0.040	0.581	?	1	17
NW_007370735.1.tRNA25-AspGTC	active	0.988	Asp-GTC	NW_007370735.1	416138	416210	+	6	-26.4	66.5	0.454	9	0.049	0.599	-4.338	4	36
NW_007370678.1.tRNA587-AspGTC	active	0.987	Asp-GTC	NW_007370678.1	15033784	15033856	-	6	-26.4	66.5	1.340	12	0.040	0.891	-2.998	0	46
NW_007370678.1.tRNA620-AspGTC	active	0.987	Asp-GTC	NW_007370678.1	13119388	13119460	-	6	-26.4	65.4	0.803	8	0.049	0.864	-3.603	1	20
NW_007370811.1.tRNA277-AspGTC	active	0.987	Asp-GTC	NW_007370811.1	1353350	1353422	-	6	-26.4	66.5	0.638	12	0.074	0.817	-3.028	2	52
NW_007370735.1.tRNA18-AspGTC	active	0.986	Asp-GTC	NW_007370735.1	375544	375616	+	6	-26.4	66.5	?	12	0.106	0.727	?	5	28
NW_007370741.1.tRNA99-AspGTC	active	0.925	Asp-GTC	NW_007370741.1	4091592	4091664	+	6	-26.4	66.5	1.104	11	0.044	0.262	-5.431	5	108
NW_007370745.1.tRNA7-CysACA	inactive	-0.717	Cys-ACA	NW_007370745.1	214918	214990	+	1	-25	67.2	0.363	151	0.006	0.052	-1.789	1	57
NW_007370743.1.tRNA284-CysGCA	active	0.988	Cys-GCA	NW_007370743.1	4478222	4478294	-	17	-26.1	81.9	1.281	9	0.038	0.639	-2.717	1	67
NW_007370743.1.tRNA300-CysGCA	active	0.987	Cys-GCA	NW_007370743.1	4313344	4313416	-	17	-23.9	81.8	1.268	6	0.057	0.942	-2.240	2	53
NW_007370743.1.tRNA301-CysGCA	active	0.94	Cys-GCA	NW_007370743.1	4308760	4308832	-	17	-24.6	77.2	0.713	11	0.019	0.536	-1.765	2	52
NW_007370826.1.tRNA12-CysGCA	active	0.9	Cys-GCA	NW_007370826.1	386684	386756	+	17	-26.1	78.3	-0.069	9	0.085	0.834	-2.761	0	23
NW_007370743.1.tRNA283-CysGCA	active	0.804	Cys-GCA	NW_007370743.1	4479067	4479139	-	17	-26.1	81.9	1.283	13	0.026	0.211	-5.356	1	67
NW_007370743.1.tRNA197-CysGCA	inactive	-0.515	Cys-GCA	NW_007370743.1	4311583	4311655	+	17	-26.1	81.9	0.732	15	0.009	0.246	-3.633	2	53
NW_007370654.1.tRNA384-CysGCA	inactive	-0.648	Cys-GCA	NW_007370654.1	14764097	14764169	+	17	-24.6	81.8	1.050	9	0.006	0.130	-2.006	0	9
NW_007370743.1.tRNA302-CysGCA	inactive	-0.666	Cys-GCA	NW_007370743.1	4292952	4293025	-	17	-24.4	72.6	0.739	8	0.010	0.313	-2.846	0	59
NW_007370745.1.tRNA12-CysGCA	inactive	-0.67	Cys-GCA	NW_007370745.1	326861	326933	+	17	-24.6	77.2	0.346	12	0.010	0.286	-2.124	2	15
NW_007370745.1.tRNA188-CysGCA	inactive	-0.706	Cys-GCA	NW_007370745.1	244721	244793	-	17	-24.6	77.2	0.090	9	0.003	0.117	-2.661	2	31
NW_007370745.1.tRNA11-CysGCA	inactive	-0.715	Cys-GCA	NW_007370745.1	324436	324508	+	17	-26.1	77.3	0.195	11	0.006	0.124	-2.430	1	15
NW_007370745.1.tRNA15-CysGCA	inactive	-0.742	Cys-GCA	NW_007370745.1	334758	334830	+	17	-24.6	74	-0.081	11	0.005	0.127	-3.206	1	13
NW_007375151.1.tRNA1-CysGCA	inactive	-0.77	Cys-GCA	NW_007375151.1	1160	1232	+	17	-26.1	77.3	0.280	12	0.012	0.174	-1.764	0	0
NW_007370745.1.tRNA187-CysGCA	inactive	-0.773	Cys-GCA	NW_007370745.1	245707	245779	-	17	-26.1	77.3	0.307	10	0.006	0.138	-1.818	2	31
NW_007370745.1.tRNA8-CysGCA	inactive	-0.791	Cys-GCA	NW_007370745.1	223911	223983	+	17	-26.1	81.9	0.353	7	0.009	0.152	-1.091	1	54
NW_007370745.1.tRNA178-CysGCA	inactive	-0.792	Cys-GCA	NW_007370745.1	471910	471982	-	17	-23.9	77.1	-0.063	11	0.006	0.189	-2.860	0	42
NW_007370745.1.tRNA189-CysGCA	inactive	-0.848	Cys-GCA	NW_007370745.1	236861	236933	-	17	-24.6	75	0.561	12	0.006	0.051	-1.291	2	45
NW_007370659.1.tRNA817-GlnCTG	active	0.987	Gln-CTG	NW_007370659.1	26098028	26098100	+	6	-24.7	71.5	1.256	13	0.028	0.592	-3.063	0	19
NW_007371001.1.tRNA37-GlnCTG	active	0.986	Gln-CTG	NW_007371001.1	289330	289402	-	6	-22	66.9	0.361	7	0.028	0.693	-3.811	0	32
NW_007370814.1.tRNA89-GlnCTG	active	0.982	Gln-CTG	NW_007370814.1	2471320	2471392	+	6	-24.7	71.5	0.932	4	0.045	0.591	-3.804	2	7
NW_007371001.1.tRNA8-GlnCTG	active	0.97	Gln-CTG	NW_007371001.1	257555	257627	+	6	-24.7	71.5	0.750	14	0.022	0.579	-1.873	4	30
NW_007370741.1.tRNA222-GlnCTG	active	0.779	Gln-CTG	NW_007370741.1	4180806	4180878	-	6	-24.7	71.5	1.229	9	0.013	0.651	-5.541	4	91
NW_007370762.1.tRNA16-GlnCTG	inactive	-0.824	Gln-CTG	NW_007370762.1	354800	354872	+	6	-24.2	71.1	-0.379	9	0.014	0.172	-0.873	0	79
NW_007370743.1.tRNA388-GlnTTG	active	0.905	Gln-TTG	NW_007370743.1	2636988	2637060	-	3	-27.1	72.6	1.370	9	0.082	0.748	-0.100	0	28
NW_007370691.1.tRNA8-GlnTTG	active	0.86	Gln-TTG	NW_007370691.1	53143	53215	+	3	-29.4	76.3	0.378	17	0.025	0.602	-2.824	10	32
NW_007370691.1.tRNA7-GlnTTG	active	0.8	Gln-TTG	NW_007370691.1	52622	52694	+	3	-22	66.9	0.618	6	0.019	0.280	-2.693	11	32
NW_007370718.1.tRNA428-GluCTC	active	0.986	Glu-CTC	NW_007370718.1	563926	563998	-	5	-26.4	73.2	?	6	0.030	0.476	?	1	31
NW_007370735.1.tRNA21-GluCTC	active	0.984	Glu-CTC	NW_007370735.1	381432	381504	+	5	-26.4	73.2	?	2	0.057	0.682	?	5	29
NW_007370651.1.tRNA1163-GluCTC	active	0.979	Glu-CTC	NW_007370651.1	60305693	60305765	+	5	-26.4	73.2	0.976	7	0.026	0.667	-4.749	0	8
NW_007370735.1.tRNA142-GluCTC	active	0.841	Glu-CTC	NW_007370735.1	5412510	5412582	+	5	-26.4	73.2	1.080	6	0.017	1.061	-4.515	2	40
NW_007370735.1.tRNA22-GluCTC	active	0.758	Glu-CTC	NW_007370735.1	384152	384224	+	5	-26.4	73.2	0.014	64	0.076	3.000	0.214	4	29
NW_007371091.1.tRNA9-GluTTC	active	0.926	Glu-TTC	NW_007371091.1	109174	109246	+	3	-26.7	71.2	1.161	10	0.060	0.803	-4.832	0	16
NW_007370682.1.tRNA356-GluTTC	active	0.912	Glu-TTC	NW_007370682.1	15159788	15159860	-	3	-26.7	71.2	1.358	10	0.066	1.190	-4.532	0	9
NW_007370682.1.tRNA431-GluTTC	active	0.888	Glu-TTC	NW_007370682.1	11219164	11219236	-	3	-24.8	70.4	1.206	7	0.098	1.219	-1.622	0	5
NW_007370823.1.tRNA12-GlyCCC	active	0.983	Gly-CCC	NW_007370823.1	541662	541733	+	4	-31.4	75.1	1.202	7	0.080	0.828	-5.312	0	129
NW_007370692.1.tRNA181-GlyCCC	active	0.916	Gly-CCC	NW_007370692.1	6560106	6560177	+	4	-31.4	75.1	1.167	51	0.036	0.294	-4.619	0	37
NW_007370691.1.tRNA479-GlyCCC	active	0.738	Gly-CCC	NW_007370691.1	12851223	12851294	+	4	-27.6	82	-0.054	15	0.022	0.267	-1.575	1	38
NW_007375701.1.tRNA1-GlyCCC	active	0.55	Gly-CCC	NW_007375701.1	1256	1328	-	4	-16	54.9	?	224	0.018	0.819	?	0	0
NW_007370735.1.tRNA300-GlyGCC	active	0.988	Gly-GCC	NW_007370735.1	382029	382100	-	9	-28.8	79.3	?	11	0.057	0.646	?	5	29
NW_007370741.1.tRNA224-GlyGCC	active	0.988	Gly-GCC	NW_007370741.1	4174951	4175022	-	9	-26.4	81	0.680	7	0.048	0.456	-4.216	5	87
NW_007371001.1.tRNA3-GlyGCC	active	0.987	Gly-GCC	NW_007371001.1	202051	202122	+	9	-26.4	81	0.899	6	0.029	0.668	-4.163	1	25
NW_007370661.1.tRNA1117-GlyGCC	active	0.982	Gly-GCC	NW_007370661.1	29618501	29618572	-	9	-26.4	81	1.056	9	0.032	0.581	-1.100	2	17
NW_007370735.1.tRNA298-GlyGCC	active	0.949	Gly-GCC	NW_007370735.1	412328	412399	-	9	-26.4	81	0.960	8	0.089	0.827	-0.264	4	34
NW_007370658.1.tRNA586-GlyGCC	active	0.926	Gly-GCC	NW_007370658.1	27605238	27605309	+	9	-26.4	81	0.856	8	0.029	0.264	-5.065	1	9
NW_007370691.1.tRNA4-GlyGCC	active	0.888	Gly-GCC	NW_007370691.1	50629	50700	+	9	-26.4	81	0.493	7	0.026	1.105	-4.652	12	32
NW_007370661.1.tRNA948-GlyGCC	active	0.8	Gly-GCC	NW_007370661.1	29626615	29626686	+	9	-26.4	81	0.677	12	0.023	0.364	-0.959	2	19
NW_007370661.1.tRNA1118-GlyGCC	active	0.628	Gly-GCC	NW_007370661.1	29617727	29617798	-	9	-26.4	81	1.065	9	0.021	0.239	-0.200	2	16
NW_007370735.1.tRNA24-GlyTCC	active	0.987	Gly-TCC	NW_007370735.1	415585	415657	+	5	-25.1	73.8	0.759	6	0.049	0.703	-2.864	4	36
NW_007370713.1.tRNA698-GlyTCC	active	0.985	Gly-TCC	NW_007370713.1	1597878	1597950	-	5	-25.1	73.8	0.717	15	0.075	1.041	-4.895	0	33
NW_007370741.1.tRNA232-GlyTCC	active	0.984	Gly-TCC	NW_007370741.1	4092262	4092334	-	5	-25.1	73.8	0.826	6	0.049	0.829	-3.501	5	107
NW_007370735.1.tRNA20-GlyTCC	active	0.982	Gly-TCC	NW_007370735.1	381128	381200	+	5	-25.1	73.8	?	12	0.076	0.799	?	5	29
NW_007370735.1.tRNA143-GlyTCC	active	0.898	Gly-TCC	NW_007370735.1	5414006	5414078	+	5	-25.1	73.8	1.080	10	0.032	0.259	-3.018	2	40
NW_007370669.1.tRNA840-HisGTG	active	0.967	His-GTG	NW_007370669.1	11551351	11551423	-	5	-25.5	60.1	1.345	33	0.060	0.800	-0.513	2	60
NW_007370669.1.tRNA325-HisGTG	active	0.962	His-GTG	NW_007370669.1	11552015	11552087	+	5	-25.5	60.1	1.233	30	0.049	0.789	-0.247	2	59
NW_007370669.1.tRNA841-HisGTG	active	0.959	His-GTG	NW_007370669.1	11549843	11549915	-	5	-25.5	60.1	1.248	33	0.048	0.695	0.166	2	63
NW_007370679.1.tRNA452-HisGTG	active	0.921	His-GTG	NW_007370679.1	12408032	12408104	-	5	-25.5	60.1	0.745	14	0.048	0.729	-0.246	0	0
NW_007370775.1.tRNA182-HisGTG	active	0.752	His-GTG	NW_007370775.1	3708985	3709057	-	5	-25.5	60.1	0.000	28	0.067	0.870	0.000	1	17
NW_007370741.1.tRNA229-IleAAT	active	0.988	Ile-AAT	NW_007370741.1	4117322	4117396	-	8	-25.5	81.2	1.311	11	0.031	0.737	-5.934	3	110
NW_007371001.1.tRNA42-IleAAT	active	0.986	Ile-AAT	NW_007371001.1	244398	244472	-	8	-23.3	67.1	?	8	0.030	0.662	?	5	33
NW_007370852.1.tRNA77-IleAAT	active	0.985	Ile-AAT	NW_007370852.1	1877818	1877892	-	8	-25.5	81.2	0.763	22	0.088	0.942	-3.911	0	24
NW_007371001.1.tRNA14-IleAAT	active	0.981	Ile-AAT	NW_007371001.1	304108	304182	+	8	-25.5	81.2	0.332	11	0.083	1.078	-3.385	5	26
NW_007371001.1.tRNA11-IleAAT	active	0.967	Ile-AAT	NW_007371001.1	299523	299597	+	8	-25.5	78.3	0.063	9	0.054	0.687	-2.865	5	29
NW_007371001.1.tRNA27-IleAAT	active	0.912	Ile-AAT	NW_007371001.1	370464	370538	-	8	-25.5	81.2	1.071	7	0.058	0.666	-4.218	8	38
NW_007370741.1.tRNA95-IleAAT	active	0.911	Ile-AAT	NW_007370741.1	4088327	4088401	+	8	-25.5	81.2	1.086	12	0.040	0.238	-3.871	5	112
NW_007370677.1.tRNA12-IleAAT	inactive	-0.794	Ile-AAT	NW_007370677.1	957601	957675	+	8	-26.9	52.7	0.000	246	0.004	0.332	0.000	0	4
NW_007370661.1.tRNA54-IleTAT	active	0.924	Ile-TAT	NW_007370661.1	1289900	1289993	+	3	-27.3	73.8	1.208	1	0.049	0.634	-0.318	0	105
NW_007371001.1.tRNA40-IleTAT	active	0.905	Ile-TAT	NW_007371001.1	245604	245698	-	3	-35	73.1	0.842	2	0.093	1.030	-1.070	5	33
NW_007370657.1.tRNA1626-IleTAT	active	0.903	Ile-TAT	NW_007370657.1	13732948	13733041	-	3	-29.5	73.2	1.157	6	0.106	0.915	0.137	0	18
NW_007370948.1.tRNA21-LeuAAG	active	0.937	Leu-AAG	NW_007370948.1	542871	542953	+	3	-30.7	74.8	0.999	5	0.033	0.603	-4.672	3	7
NW_007370814.1.tRNA88-LeuAAG	active	0.925	Leu-AAG	NW_007370814.1	2468425	2468507	+	3	-33.3	75.2	0.442	4	0.096	0.733	-3.107	2	10
NW_007370731.1.tRNA21-LeuAAG	active	0.924	Leu-AAG	NW_007370731.1	530963	531045	+	3	-30.7	74.8	1.273	10	0.077	0.792	-5.369	0	42
NW_007371001.1.tRNA5-LeuCAA	active	0.937	Leu-CAA	NW_007371001.1	248892	248999	+	3	-34.8	70.3	0.508	8	0.027	0.430	-3.121	6	33
NW_007370718.1.tRNA427-LeuCAA	active	0.92	Leu-CAA	NW_007370718.1	564220	564325	-	3	-40	78.1	?	6	0.065	0.740	?	1	31
NW_007370814.1.tRNA91-LeuCAA	active	0.896	Leu-CAA	NW_007370814.1	2564635	2564739	+	3	-39.9	75.7	0.982	5	0.078	0.992	-3.069	0	4
NW_007370735.1.tRNA297-LeuCAG	active	0.948	Leu-CAG	NW_007370735.1	415039	415122	-	3	-35.7	78.2	0.805	7	0.038	0.707	-4.628	4	36
NW_007370728.1.tRNA20-LeuCAG	active	0.929	Leu-CAG	NW_007370728.1	500720	500803	+	3	-35.7	78.2	1.183	9	0.069	0.985	-5.800	1	38
NW_007370728.1.tRNA561-LeuCAG	active	0.929	Leu-CAG	NW_007370728.1	501042	501125	-	3	-35.7	78.2	0.861	8	0.046	0.895	-1.858	1	38
NW_007370651.1.tRNA1634-LeuTAA	active	0.886	Leu-TAA	NW_007370651.1	47390584	47390667	-	2	-32.3	88.1	1.087	6	0.097	0.945	-2.331	0	4
NW_007371001.1.tRNA12-LeuTAA	active	0.856	Leu-TAA	NW_007371001.1	301927	302010	+	2	-33.8	89.6	0.141	18	0.023	0.427	-1.077	5	27
NW_007370741.1.tRNA107-LeuTAG	active	0.95	Leu-TAG	NW_007370741.1	4180279	4180361	+	2	-34.3	74.5	1.342	9	0.028	0.412	-3.447	4	92
NW_007370731.1.tRNA331-LeuTAG	active	0.937	Leu-TAG	NW_007370731.1	426844	426926	-	2	-30.8	73.9	1.237	18	0.050	0.750	-4.329	0	61
NW_007370847.1.tRNA145-LysCTT	active	0.988	Lys-CTT	NW_007370847.1	599702	599775	-	7	-28	87.8	0.810	11	0.038	0.772	-3.459	2	37
NW_007371001.1.tRNA29-LysCTT	active	0.988	Lys-CTT	NW_007371001.1	368920	368993	-	7	-28	87.8	?	5	0.034	0.538	?	7	39
NW_007371001.1.tRNA30-LysCTT	active	0.987	Lys-CTT	NW_007371001.1	368770	368843	-	7	-28	87.8	0.738	5	0.036	0.827	-4.830	7	39
NW_007370659.1.tRNA509-LysCTT	active	0.982	Lys-CTT	NW_007370659.1	16434866	16434939	+	7	-30.1	88	1.053	4	0.035	1.300	-4.393	0	36
NW_007370735.1.tRNA144-LysCTT	active	0.93	Lys-CTT	NW_007370735.1	5415730	5415803	+	7	-28	87.8	0.093	5	0.048	0.699	-0.599	2	38
NW_007370716.1.tRNA118-LysCTT	active	0.766	Lys-CTT	NW_007370716.1	3204885	3204958	+	7	-28	80.3	?	225	0.022	0.213	?	0	58
NW_007370702.1.tRNA89-LysCTT	active	0.761	Lys-CTT	NW_007370702.1	4161175	4161243	+	7	-19.2	63.9	?	23	0.021	0.000	?	0	4
NW_007370741.1.tRNA221-LysTTT	active	0.988	Lys-TTT	NW_007370741.1	4181674	4181747	-	5	-27.5	87.8	1.335	6	0.047	0.919	-5.514	4	92
NW_007370701.1.tRNA18-LysTTT	active	0.987	Lys-TTT	NW_007370701.1	600327	600400	+	5	-27.5	87.8	0.740	6	0.057	0.704	-4.569	4	35
NW_007370750.1.tRNA73-LysTTT	active	0.987	Lys-TTT	NW_007370750.1	2399695	2399768	+	5	-27.5	87.8	1.165	5	0.039	0.826	-4.315	1	33
NW_007370750.1.tRNA252-LysTTT	active	0.937	Lys-TTT	NW_007370750.1	2400075	2400148	-	5	-27.5	87.8	0.176	5	0.026	0.272	-5.046	1	33
NW_007371001.1.tRNA20-LysTTT	active	0.898	Lys-TTT	NW_007371001.1	372019	372092	+	5	-27.5	85.4	0.390	6	0.022	0.872	-2.384	9	34
NW_007370670.1.tRNA217-MetCAT	active	0.986	Met-CAT	NW_007370670.1	10232207	10232280	+	9	-25	82.3	0.807	6	0.071	0.838	-2.769	0	31
NW_007370814.1.tRNA96-MetCAT	active	0.978	Met-CAT	NW_007370814.1	2467784	2467857	-	9	-25.8	76.7	0.908	8	0.087	0.912	-2.928	2	11
NW_007371001.1.tRNA18-MetCAT	active	0.938	Met-CAT	NW_007371001.1	346802	346875	+	9	-26.7	77.9	?	4	0.036	0.374	?	3	47
NW_007371001.1.tRNA17-MetCAT	active	0.92	Met-CAT	NW_007371001.1	343193	343266	+	9	-26.7	77.9	?	7	0.019	0.417	?	3	44
NW_007370790.1.tRNA59-PheGAA	active	0.978	Phe-GAA	NW_007370790.1	3094005	3094078	-	4	-21.9	88.9	0.858	13	0.089	1.106	-3.192	0	27
NW_007370701.1.tRNA424-PheGAA	active	0.966	Phe-GAA	NW_007370701.1	600918	600991	-	4	-21.9	88.9	0.989	4	0.035	0.409	-3.607	4	35
NW_007370701.1.tRNA423-PheGAA	active	0.824	Phe-GAA	NW_007370701.1	602562	602635	-	4	-21.9	88.9	0.034	4	0.027	0.258	-4.832	4	35
NW_007371001.1.tRNA41-PheGAA	active	0.592	Phe-GAA	NW_007371001.1	244662	244735	-	4	-21.9	88.9	-0.261	13	0.028	0.367	-0.744	5	33
NW_007371001.1.tRNA28-ProAGG	active	0.989	Pro-AGG	NW_007371001.1	369316	369388	-	6	-29.5	70.2	1.156	3	0.034	0.798	-4.751	7	38
NW_007370735.1.tRNA240-ProAGG	active	0.988	Pro-AGG	NW_007370735.1	3470437	3470509	-	6	-29.5	70.2	1.220	2	0.045	0.494	-4.846	1	31
NW_007370948.1.tRNA28-ProAGG	active	0.983	Pro-AGG	NW_007370948.1	543885	543957	-	6	-29.5	70.2	0.932	3	0.036	0.764	-4.473	3	7
NW_007370948.1.tRNA29-ProAGG	active	0.982	Pro-AGG	NW_007370948.1	541957	542029	-	6	-29.5	70.2	0.731	2	0.034	0.926	-3.666	3	7
NW_007370707.1.tRNA155-ProAGG	active	0.977	Pro-AGG	NW_007370707.1	3922828	3922900	+	6	-29.5	70.2	1.128	3	0.078	0.844	-5.762	1	8
NW_007370746.1.tRNA252-ProAGG	active	0.908	Pro-AGG	NW_007370746.1	1483031	1483103	-	6	-29.5	70.2	1.162	3	0.022	0.296	-1.888	0	89
NW_007370741.1.tRNA98-ProCGG	active	0.944	Pro-CGG	NW_007370741.1	4090963	4091035	+	2	-29.5	70.2	1.240	9	0.049	0.810	-3.595	5	109
NW_007370735.1.tRNA71-ProCGG	active	0.903	Pro-CGG	NW_007370735.1	3469729	3469801	+	2	-29.5	70.2	0.989	13	0.095	0.955	-1.317	1	31
NW_007370847.1.tRNA37-ProTGG	active	0.987	Pro-TGG	NW_007370847.1	619614	619686	+	4	-29.5	70.3	0.690	2	0.069	0.768	-4.135	2	32
NW_007370665.1.tRNA756-ProTGG	active	0.983	Pro-TGG	NW_007370665.1	27836340	27836412	-	4	-29.5	70.3	0.614	2	0.088	0.649	-4.983	0	27
NW_007370707.1.tRNA386-ProTGG	active	0.977	Pro-TGG	NW_007370707.1	3923127	3923199	-	4	-28.9	70.5	1.307	1	0.088	0.916	-4.927	1	8
NW_007370948.1.tRNA24-ProTGG	active	0.975	Pro-TGG	NW_007370948.1	599007	599079	+	4	-29.5	70.3	1.045	7	0.044	0.578	-4.668	2	5
NW_007370839.1.tRNA50-SeCTCA	active	0.928	SeC-TCA	NW_007370839.1	676800	676887	+	1	-37.1	146.9	1.173	4	0.039	0.959	-5.721	0	52
NW_007370741.1.tRNA96-SerAGA	active	0.984	Ser-AGA	NW_007370741.1	4088793	4088875	+	5	-32.8	89.6	1.160	7	0.050	0.700	-5.522	5	113
NW_007371001.1.tRNA38-SerAGA	active	0.982	Ser-AGA	NW_007371001.1	260515	260597	-	5	-32.8	89.6	0.432	6	0.026	0.512	-2.955	2	30
NW_007370698.1.tRNA247-SerAGA	active	0.976	Ser-AGA	NW_007370698.1	7614242	7614324	+	5	-32.8	89.6	1.215	10	0.074	0.588	-1.088	0	7
NW_007370691.1.tRNA985-SerAGA	active	0.891	Ser-AGA	NW_007370691.1	44462	44544	-	5	-32.8	89.6	0.745	9	0.027	0.405	-3.180	10	31
NW_007371001.1.tRNA7-SerAGA	active	0.829	Ser-AGA	NW_007371001.1	252830	252912	+	5	-32.8	90.3	0.500	295	0.036	0.485	-0.722	7	33
NW_007370741.1.tRNA106-SerCGA	active	0.919	Ser-CGA	NW_007370741.1	4166580	4166662	+	2	-34	95.1	1.332	7	0.029	0.545	-1.347	1	76
NW_007370699.1.tRNA37-SerCGA	active	0.913	Ser-CGA	NW_007370699.1	670721	670803	+	2	-29.8	89.6	1.337	5	0.068	0.668	-1.263	0	138
NW_007370741.1.tRNA227-SerGCT	active	0.987	Ser-GCT	NW_007370741.1	4117873	4117955	-	5	-30.7	88.4	1.315	21	0.052	0.888	-4.683	3	110
NW_007370690.1.tRNA447-SerGCT	active	0.986	Ser-GCT	NW_007370690.1	12355101	12355183	-	5	-30.7	89.1	1.354	6	0.058	0.712	-3.312	0	99
NW_007370669.1.tRNA1011-SerGCT	active	0.983	Ser-GCT	NW_007370669.1	7513421	7513503	-	5	-30.7	88.4	1.276	8	0.041	0.741	-1.611	0	32
NW_007371001.1.tRNA33-SerGCT	active	0.92	Ser-GCT	NW_007371001.1	327325	327407	-	5	-32.8	91.9	?	9	0.020	0.387	?	1	37
NW_007370691.1.tRNA9-SerGCT	active	0.893	Ser-GCT	NW_007370691.1	54234	54316	+	5	-30.7	88.4	1.128	31	0.036	0.421	-5.180	10	32
NW_007370681.1.tRNA649-SerTGA	active	0.916	Ser-TGA	NW_007370681.1	9693933	9694015	-	2	-34.9	94	1.293	17	0.056	0.810	-3.193	0	11
NW_007370691.1.tRNA6-SerTGA	active	0.848	Ser-TGA	NW_007370691.1	51654	51736	+	2	-32.8	89.7	1.109	9	0.033	0.528	-4.075	12	32
NW_007371001.1.tRNA21-ThrAGT	active	0.988	Thr-AGT	NW_007371001.1	382781	382855	+	5	-27	81.4	1.269	0	0.040	0.544	-4.401	2	30
NW_007370741.1.tRNA228-ThrAGT	active	0.987	Thr-AGT	NW_007370741.1	4117565	4117639	-	5	-27.3	82.6	0.465	17	0.045	0.729	-4.890	3	110
NW_007370741.1.tRNA97-ThrAGT	active	0.985	Thr-AGT	NW_007370741.1	4089177	4089251	+	5	-27.3	82.6	1.071	27	0.045	0.812	-4.238	5	113
NW_007370661.1.tRNA464-ThrAGT	active	0.981	Thr-AGT	NW_007370661.1	15846705	15846779	+	5	-27.3	82.6	1.292	20	0.081	1.037	-1.935	0	48
NW_007371001.1.tRNA34-ThrAGT	active	0.847	Thr-AGT	NW_007371001.1	308381	308455	-	5	-27.8	80.6	1.138	10	0.014	0.647	-2.809	5	25
NW_007370694.1.tRNA731-ThrCGT	active	0.87	Thr-CGT	NW_007370694.1	6919099	6919171	-	3	-27.3	78.3	0.997	81	0.069	0.771	-0.127	0	12
NW_007371001.1.tRNA39-ThrCGT	active	0.833	Thr-CGT	NW_007371001.1	247802	247875	-	3	-29.1	79.8	0.471	11	0.030	0.413	-0.650	6	33
NW_007370665.1.tRNA1006-ThrCGT	active	0.815	Thr-CGT	NW_007370665.1	18523977	18524049	-	3	-27	79.6	1.210	26	0.124	1.001	-0.168	0	7
NW_007370847.1.tRNA36-ThrTGT	active	0.986	Thr-TGT	NW_007370847.1	617212	617285	+	4	-30.4	78	1.248	18	0.088	0.951	-4.497	2	32
NW_007370948.1.tRNA22-ThrTGT	active	0.962	Thr-TGT	NW_007370948.1	596711	596784	+	4	-30.4	78	1.176	18	0.049	0.417	-5.552	2	5
NW_007370948.1.tRNA27-ThrTGT	active	0.953	Thr-TGT	NW_007370948.1	544269	544342	-	4	-29.7	78.8	1.065	11	0.031	0.253	-3.904	3	7
NW_007370706.1.tRNA970-ThrTGT	active	0.925	Thr-TGT	NW_007370706.1	3437155	3437228	-	4	-29.1	84.1	0.294	9	0.054	0.324	-3.100	0	41
NW_007370691.1.tRNA2-TrpCCA	active	0.94	Trp-CCA	NW_007370691.1	42366	42438	+	3	-25.1	73.3	1.035	12	0.036	0.569	-3.413	7	31
NW_007370741.1.tRNA226-TrpCCA	active	0.931	Trp-CCA	NW_007370741.1	4118344	4118416	-	3	-25.1	73.3	1.265	3	0.061	0.641	-2.282	3	110
NW_007370678.1.tRNA621-TrpCCA	active	0.905	Trp-CCA	NW_007370678.1	13118557	13118629	-	3	-25.1	74.3	1.329	6	0.058	0.850	0.398	1	20
NW_007370657.1.tRNA1354-TyrGTA	active	0.987	Tyr-GTA	NW_007370657.1	23944131	23944220	-	5	-30	77.9	1.337	12	0.037	0.546	-4.327	1	83
NW_007371001.1.tRNA31-TyrGTA	active	0.984	Tyr-GTA	NW_007371001.1	366845	366933	-	5	-31.7	78	1.224	7	0.075	0.803	-3.997	7	42
NW_007370710.1.tRNA242-TyrGTA	active	0.982	Tyr-GTA	NW_007370710.1	8510583	8510672	-	5	-32.3	75.5	0.959	10	0.065	0.875	-4.306	3	10
NW_007370710.1.tRNA241-TyrGTA	active	0.977	Tyr-GTA	NW_007370710.1	8511193	8511287	-	5	-31.1	75.3	0.657	11	0.086	0.953	-3.405	3	10
NW_007370948.1.tRNA23-TyrGTA	active	0.97	Tyr-GTA	NW_007370948.1	597872	597962	+	5	-29.6	75.4	0.750	10	0.053	0.843	-4.807	2	5
NW_007370847.1.tRNA35-ValAAC	active	0.987	Val-AAC	NW_007370847.1	591121	591194	+	4	-24.7	79.4	0.478	16	0.053	0.677	-3.977	3	35
NW_007370667.1.tRNA238-ValAAC	active	0.973	Val-AAC	NW_007370667.1	12608195	12608268	+	4	-24.7	79.4	1.278	2	0.025	0.540	-7.023	0	30
NW_007371001.1.tRNA35-ValAAC	active	0.907	Val-AAC	NW_007371001.1	300371	300444	-	4	-24.7	79.4	-0.179	11	0.031	0.603	-2.009	5	27
NW_007370847.1.tRNA38-ValAAC	active	0.898	Val-AAC	NW_007370847.1	619982	620055	+	4	-24.7	79.4	-0.044	18	0.065	0.827	-5.040	2	32
NW_007370847.1.tRNA34-ValCAC	active	0.987	Val-CAC	NW_007370847.1	586565	586638	+	5	-24.7	79.4	1.138	8	0.067	0.813	-3.974	1	29
NW_007370695.1.tRNA1130-ValCAC	active	0.985	Val-CAC	NW_007370695.1	65306	65379	-	5	-24.7	79.4	?	3	0.057	0.614	?	0	24
NW_007371001.1.tRNA25-ValCAC	active	0.984	Val-CAC	NW_007371001.1	380385	380458	-	5	-24.7	79.4	1.109	4	0.096	0.734	-4.534	5	30
NW_007370735.1.tRNA302-ValCAC	active	0.921	Val-CAC	NW_007370735.1	373349	373422	-	5	-24.7	79.4	?	11	0.032	0.376	?	4	29
NW_007371001.1.tRNA13-ValCAC	active	0.874	Val-CAC	NW_007371001.1	303201	303274	+	5	-24.7	79.4	0.423	3	0.035	0.203	-2.353	5	27
NW_007370701.1.tRNA425-ValTAC	active	0.939	Val-TAC	NW_007370701.1	596458	596531	-	3	-26	77.6	0.936	1	0.056	0.777	-3.347	4	33
NW_007370752.1.tRNA285-ValTAC	active	0.911	Val-TAC	NW_007370752.1	365610	365683	-	3	-23.6	82.9	1.054	14	0.079	0.987	-6.391	0	19
NW_007371001.1.tRNA32-ValTAC	active	0.68	Val-TAC	NW_007371001.1	328466	328559	-	3	-30.2	57.1	0.000	2	0.061	0.706	0.000	1	37
NW_007370691.1.tRNA982-iMetCAT	active	0.987	iMet-CAT	NW_007370691.1	58207	58279	-	9	-26.1	60.4	0.912	6	0.041	0.764	-5.228	7	32
NW_007370775.1.tRNA273-iMetCAT	active	0.987	iMet-CAT	NW_007370775.1	2454092	2454164	-	9	-26.1	60.4	1.317	6	0.040	0.855	-4.704	0	91
NW_007370691.1.tRNA5-iMetCAT	active	0.909	iMet-CAT	NW_007370691.1	51190	51262	+	9	-26.1	60.4	0.832	12	0.030	0.709	-3.472	12	32
NW_007370691.1.tRNA3-iMetCAT	active	0.908	iMet-CAT	NW_007370691.1	42814	42886	+	9	-26.1	60.4	0.304	8	0.030	0.681	-2.804	8	31
NW_007371001.1.tRNA4-iMetCAT	active	0.836	iMet-CAT	NW_007371001.1	202467	202539	+	9	-26.1	60.4	0.947	5	0.018	0.383	-4.676	1	25

Inquiries should be directed to Bryan Thornlow
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