Cavia porcellus tRNA Activity Predictions

These data were created using the tRAP pipeline detailed in the manuscript Predicting transfer RNA gene activity from sequence and genome context.

Column Explanations:
tRNA Name: The name of the tRNA gene as you would find in GtRNAdb or after running tRNAscan-SE.
Prediction: Whether the tRNA gene is predicted as active in at least one tissue or inactive by tRAP.
Probability: The probability score output by tRAP to inform the prediction. Scores are negative if predicted as inactive. Closer to 1.0 or -1.0 indicates a stronger prediction.
tRNA Genes With Same Anticodon: The total number of tRNA genes in the genome that have the same anticodon as this tRNA gene.
Minimum Free Energy: Minimum Free Energy of the tRNA gene as predicted by RNAfold using the secondary structure output by tRNAscan-SE.
tRNAscan-SE Bit Score: The general bit score for this tRNA gene output by tRNAscan-SE.
tRNA phyloP Score: Average phyloP score in 29-way placental mammal alignment across the tRNA gene sequence.
PolyT Distance: Distance to the nearest TTTT transcription termination sequence 3' of the tRNA gene.
CpG Density: Number of observed CpG dinucleotides divided by total nucleotides for the region spanning from 350 nt 5' to 350 nt 3' of the tRNA gene.
CpG Islands Score: Number of observed CpG dinucleotides divided by the product of the observed C and the observed G nts for the region spanning from 350 nt 5' of the tRNA gene to 1 nt 5' of the tRNA gene.
5' Flank phyloP Score: Average phyloP score in 29-way placental mammal alignment across the 20 nt directly 5' of the tRNA gene sequence.
tRNA Genes Within 10 Kb: Number of other tRNA genes within 10,000 nt in either direction of the tRNA gene.
Exons Within 75 Kb: Number of exons within 75,000 nt in either direction of the tRNA gene.

tRNA Name	Prediction	Probability	Isotype & Anticodon	Chromosome	Start	End	Strand	tRNA Genes With Same Anticodon	Minimum Free Energy	tRNAscan-SE Bit Score	tRNA phyloP Score	PolyT Distance	CpG Density	CpG Islands Score	5' Flank phyloP Score	tRNA Genes Within 10 Kb	Exons Within 75 Kb
tRNA-Ala-AGC-1-1	active	0.889	Ala-AGC	scaffold_108	1183453	1183525	+	19	-30.4	85.3	0.272	58	0.027	0.693	-0.632	4	16
tRNA-Ala-AGC-1-2	active	0.923	Ala-AGC	scaffold_108	1190504	1190576	+	19	-30.4	85.3	0.282	50	0.088	0.809	-0.453	5	17
tRNA-Ala-AGC-10-1	inactive	-0.933	Ala-AGC	scaffold_65	1710641	1710714	+	19	-22.9	66.1	0.000	69	0.012	0.166	0.000	0	41
tRNA-Ala-AGC-11-1	inactive	-0.876	Ala-AGC	scaffold_20	9293072	9293144	-	19	-26.2	66	-0.187	242	0.013	0.241	-0.124	0	14
tRNA-Ala-AGC-12-1	inactive	-0.949	Ala-AGC	scaffold_101	2628204	2628276	+	19	-18.6	52.9	-0.071	351	0.004	0.103	-0.159	0	7
tRNA-Ala-AGC-13-1	inactive	-0.795	Ala-AGC	scaffold_4	4510756	4510830	-	19	-8.5	65.6	?	69	0.004	0.000	?	0	0
tRNA-Ala-AGC-14-1	active	0.547	Ala-AGC	scaffold_108	1240839	1240911	-	19	-20	56.6	0.000	122	0.031	0.720	-0.662	3	20
tRNA-Ala-AGC-15-1	inactive	-0.9	Ala-AGC	scaffold_184	401746	401818	-	19	-12.5	61.4	-0.148	351	0.008	0.265	-0.460	0	102
tRNA-Ala-AGC-2-1	active	0.766	Ala-AGC	scaffold_108	1201354	1201426	-	19	-31.9	85.8	-0.030	68	0.065	0.824	-0.132	5	21
tRNA-Ala-AGC-2-2	active	0.914	Ala-AGC	scaffold_108	1241049	1241121	-	19	-31.9	85.8	0.195	65	0.056	0.835	-0.595	3	20
tRNA-Ala-AGC-3-1	active	0.751	Ala-AGC	scaffold_22	2968397	2968469	+	19	-31.9	84.7	0.282	178	0.023	0.438	-0.710	1	71
tRNA-Ala-AGC-3-2	active	0.921	Ala-AGC	scaffold_108	1181506	1181578	+	19	-31.9	84.7	0.247	1	0.110	0.825	-0.338	3	15
tRNA-Ala-AGC-4-1	active	0.798	Ala-AGC	scaffold_108	1205721	1205793	+	19	-30.4	80.8	-0.204	17	0.056	0.841	0.000	3	21
tRNA-Ala-AGC-5-1	active	0.676	Ala-AGC	scaffold_108	1200858	1200930	-	19	-21.8	70.4	-0.061	68	0.034	0.698	0.000	5	21
tRNA-Ala-AGC-6-1	active	0.81	Ala-AGC	scaffold_42	8540810	8540883	-	19	-27.7	55.7	0.766	8	0.038	0.739	-2.162	0	26
tRNA-Ala-AGC-7-1	active	0.974	Ala-AGC	scaffold_0	46309309	46309382	-	19	-32	59.7	1.611	1	0.056	1.099	-1.183	2	19
tRNA-Ala-AGC-7-2	active	0.979	Ala-AGC	scaffold_18	8902297	8902370	+	19	-32	59.7	1.566	6	0.089	0.962	-2.516	1	87
tRNA-Ala-AGC-8-1	active	0.96	Ala-AGC	scaffold_38	21206825	21206898	-	19	-29.6	58.9	1.066	1	0.038	0.527	-2.784	7	23
tRNA-Ala-AGC-9-1	active	0.751	Ala-AGC	scaffold_38	21338831	21338904	-	19	-28.6	54.4	0.172	4	0.036	0.776	-0.809	3	13
tRNA-Ala-CGC-1-1	inactive	-0.605	Ala-CGC	scaffold_27	27055708	27055780	+	5	-30.4	84.2	0.200	16	0.008	0.049	-0.308	0	0
tRNA-Ala-CGC-2-1	active	0.982	Ala-CGC	scaffold_38	21198493	21198565	+	5	-26.5	79.7	1.405	8	0.025	0.576	-3.877	5	22
tRNA-Ala-CGC-3-1	active	0.982	Ala-CGC	scaffold_3	31957609	31957681	-	5	-27.6	74.4	1.602	18	0.044	0.725	-2.378	1	11
tRNA-Ala-CGC-4-1	active	0.946	Ala-CGC	scaffold_108	1192210	1192282	-	5	-25.7	78	0.211	6	0.096	0.981	-0.461	6	17
tRNA-Ala-CGC-5-1	active	0.797	Ala-CGC	scaffold_108	1233476	1233548	-	5	-32.1	78.3	0.000	18	0.070	0.820	0.000	3	20
tRNA-Ala-TGC-1-1	active	0.988	Ala-TGC	scaffold_21	33807425	33807497	+	10	-26.5	79.7	1.351	6	0.036	0.581	-3.758	1	25
tRNA-Ala-TGC-1-2	active	0.986	Ala-TGC	scaffold_178	1196806	1196878	+	10	-26.5	79.7	1.322	5	0.038	0.591	-1.083	4	54
tRNA-Ala-TGC-2-1	active	0.944	Ala-TGC	scaffold_108	1236117	1236189	+	10	-26.5	78.7	0.256	23	0.069	0.850	-0.531	3	20
tRNA-Ala-TGC-2-2	active	0.979	Ala-TGC	scaffold_178	1193113	1193185	-	10	-26.5	78.7	0.244	1	0.101	0.953	-0.988	4	57
tRNA-Ala-TGC-3-1	active	0.931	Ala-TGC	scaffold_108	1212224	1212296	+	10	-28.2	78.3	0.109	62	0.025	0.463	-2.090	2	25
tRNA-Ala-TGC-4-1	active	0.927	Ala-TGC	scaffold_108	1193576	1193648	-	10	-31.7	78.2	0.246	11	0.021	0.572	-0.962	5	17
tRNA-Ala-TGC-5-1	inactive	-0.893	Ala-TGC	scaffold_2	34673911	34673983	-	10	-8.2	61.3	-0.030	351	0.003	0.056	-1.015	0	4
tRNA-Ala-TGC-6-1	inactive	-0.913	Ala-TGC	scaffold_25	11925451	11925523	+	10	-22.7	56.4	0.000	187	0.013	0.292	-0.070	0	23
tRNA-Ala-TGC-7-1	inactive	-0.92	Ala-TGC	scaffold_41	14596357	14596430	-	10	-10.6	62.1	-0.075	147	0.001	0.102	-0.315	0	27
tRNA-Ala-TGC-8-1	inactive	-0.87	Ala-TGC	scaffold_20	15834515	15834586	+	10	-13.3	55.8	0.000	9	0.000	0.000	0.000	0	10
tRNA-Arg-ACG-1-1	active	0.986	Arg-ACG	scaffold_0	46310495	46310568	+	7	-26.3	64.9	0.692	3	0.060	0.798	-2.041	2	19
tRNA-Arg-ACG-2-1	active	0.958	Arg-ACG	scaffold_13	17849288	17849361	-	7	-25.4	67.6	1.606	63	0.041	0.759	-3.353	0	71
tRNA-Arg-ACG-2-2	active	0.989	Arg-ACG	scaffold_38	21177942	21178015	+	7	-25.4	67.6	1.276	15	0.053	0.716	-2.675	2	30
tRNA-Arg-ACG-3-1	active	0.986	Arg-ACG	scaffold_7	46626356	46626429	-	7	-23.1	64.2	1.482	9	0.070	1.017	-3.245	0	55
tRNA-Arg-ACG-3-2	active	0.657	Arg-ACG	scaffold_38	20619650	20619723	+	7	-23.1	64.2	-0.053	9	0.026	0.657	-0.626	5	10
tRNA-Arg-ACG-3-3	active	0.972	Arg-ACG	scaffold_108	1707561	1707634	+	7	-23.1	64.2	0.214	11	0.057	0.674	-0.770	6	13
tRNA-Arg-ACG-3-4	active	0.941	Arg-ACG	scaffold_108	1856572	1856645	+	7	-23.1	64.2	0.406	6	0.072	0.586	-0.316	2	34
tRNA-Arg-CCG-1-1	active	0.895	Arg-CCG	scaffold_108	1178041	1178114	-	3	-27.1	67	0.354	3	0.082	0.941	-0.553	2	15
tRNA-Arg-CCG-2-1	active	0.943	Arg-CCG	scaffold_4	23148062	23148135	+	3	-26.3	64.1	1.332	12	0.052	0.786	-5.309	3	27
tRNA-Arg-CCG-3-1	active	0.889	Arg-CCG	scaffold_65	5789718	5789791	+	3	-29	64.9	1.634	8	0.062	1.062	0.272	0	28
tRNA-Arg-CCT-1-1	active	0.947	Arg-CCT	scaffold_76	190953	191026	-	5	-32.1	71.1	1.019	11	0.034	0.818	-0.158	2	72
tRNA-Arg-CCT-1-2	active	0.958	Arg-CCT	scaffold_76	192313	192386	-	5	-32.1	71.1	1.262	52	0.053	0.541	-3.197	2	72
tRNA-Arg-CCT-2-1	active	0.979	Arg-CCT	scaffold_4	23175544	23175617	+	5	-32.1	72.3	0.783	33	0.027	0.616	-2.197	2	24
tRNA-Arg-CCT-3-1	active	0.979	Arg-CCT	scaffold_4	23150727	23150800	+	5	-30.6	71.7	0.909	13	0.023	0.715	-2.785	4	27
tRNA-Arg-CCT-4-1	active	0.978	Arg-CCT	scaffold_10	9150809	9150882	-	5	-27.2	65.6	1.607	6	0.066	1.130	-1.189	0	27
tRNA-Arg-TCG-1-1	active	0.983	Arg-TCG	scaffold_10	34687829	34687902	-	4	-29.2	74.8	1.468	19	0.083	0.904	-2.984	0	63
tRNA-Arg-TCG-2-1	active	0.882	Arg-TCG	scaffold_76	191231	191304	-	4	-25.9	68.8	-0.121	9	0.087	0.970	-0.948	2	72
tRNA-Arg-TCG-3-1	active	0.933	Arg-TCG	scaffold_38	20613730	20613803	+	4	-23.7	65.5	0.322	49	0.030	0.678	-0.810	5	12
tRNA-Arg-TCG-4-1	active	0.98	Arg-TCG	scaffold_38	20586801	20586874	+	4	-23.7	64.3	1.084	2	0.023	0.641	-5.262	4	16
tRNA-Arg-TCT-1-1	active	0.979	Arg-TCT	scaffold_86	374584	374670	-	5	-27.1	70.3	0.354	1	0.073	0.900	-0.784	6	39
tRNA-Arg-TCT-2-1	active	0.973	Arg-TCT	scaffold_108	1742098	1742187	-	5	-28.1	71.9	0.310	7	0.048	0.735	-0.898	5	7
tRNA-Arg-TCT-3-1	active	0.972	Arg-TCT	scaffold_2	19581520	19581605	+	5	-30.7	71.1	1.634	5	0.096	0.862	0.732	0	17
tRNA-Arg-TCT-4-1	active	0.969	Arg-TCT	scaffold_61	8554331	8554418	-	5	-25.6	70.8	1.498	1	0.046	0.797	-0.270	3	94
tRNA-Arg-TCT-5-1	active	0.731	Arg-TCT	scaffold_56	8692130	8692204	-	5	-27.7	78.5	1.565	19	0.021	0.243	1.498	0	17
tRNA-Asn-GTT-1-1	active	0.823	Asn-GTT	scaffold_2	46477909	46477983	+	15	-26.4	80.9	0.040	10	0.081	1.001	-0.284	2	16
tRNA-Asn-GTT-1-2	active	0.987	Asn-GTT	scaffold_53	9799277	9799351	-	15	-26.4	80.9	1.583	5	0.053	0.766	-1.929	0	83
tRNA-Asn-GTT-1-3	active	0.984	Asn-GTT	scaffold_56	11165423	11165497	-	15	-26.4	80.9	0.171	6	0.027	0.508	-2.189	6	23
tRNA-Asn-GTT-1-4	active	0.988	Asn-GTT	scaffold_56	11222707	11222781	+	15	-26.4	80.9	1.214	10	0.047	0.805	-4.413	2	20
tRNA-Asn-GTT-1-5	active	0.969	Asn-GTT	scaffold_91	3285599	3285673	+	15	-26.4	80.9	1.401	6	0.102	0.943	-3.422	0	2
tRNA-Asn-GTT-1-6	active	0.984	Asn-GTT	scaffold_320	213168	213242	+	15	-26.4	80.9	0.652	7	0.076	0.846	-1.556	1	86
tRNA-Asn-GTT-2-1	active	0.985	Asn-GTT	scaffold_6	32122965	32123039	-	15	-26.4	79.9	1.246	4	0.099	0.868	-1.963	0	17
tRNA-Asn-GTT-3-1	active	0.832	Asn-GTT	scaffold_2	10797165	10797239	-	15	-26.4	77.6	0.198	28	0.035	0.412	-0.621	0	3
tRNA-Asn-GTT-3-2	active	0.965	Asn-GTT	scaffold_2	46567308	46567382	+	15	-26.4	77.6	0.231	11	0.047	0.617	-0.863	1	1
tRNA-Asn-GTT-3-3	active	0.958	Asn-GTT	scaffold_2	46637886	46637960	-	15	-26.4	77.6	0.199	11	0.041	0.555	-0.753	0	7
tRNA-Asn-GTT-3-4	active	0.836	Asn-GTT	scaffold_2	46881368	46881442	+	15	-26.4	77.6	0.009	11	0.044	0.555	-0.698	1	4
tRNA-Asn-GTT-3-5	active	0.951	Asn-GTT	scaffold_2	47126865	47126939	-	15	-26.4	77.6	0.165	11	0.041	0.588	-0.723	2	5
tRNA-Asn-GTT-4-1	active	0.95	Asn-GTT	scaffold_2	10754461	10754535	+	15	-26.4	76.6	0.156	28	0.036	0.481	-0.761	1	2
tRNA-Asn-GTT-5-1	active	0.617	Asn-GTT	scaffold_2	47463448	47463521	-	15	-19.3	60.4	0.014	11	0.038	0.553	-0.703	0	20
tRNA-Asn-GTT-6-1	inactive	-0.602	Asn-GTT	scaffold_2	47134985	47135059	-	15	-16.9	54.4	-0.293	42	0.032	0.573	-0.503	1	5
tRNA-Asp-GTC-1-1	active	0.912	Asp-GTC	scaffold_9	3670096	3670168	-	9	-26.4	65.4	1.035	9	0.043	0.303	-3.907	1	15
tRNA-Asp-GTC-2-1	active	0.988	Asp-GTC	scaffold_9	5778566	5778638	-	9	-26.4	66.5	1.600	12	0.041	0.651	-2.819	0	45
tRNA-Asp-GTC-2-2	active	0.872	Asp-GTC	scaffold_56	11171470	11171542	-	9	-26.4	66.5	0.137	11	0.135	0.961	-0.513	7	23
tRNA-Asp-GTC-2-3	active	0.872	Asp-GTC	scaffold_56	11181726	11181798	-	9	-26.4	66.5	0.137	11	0.135	0.971	-0.446	7	21
tRNA-Asp-GTC-2-4	active	0.978	Asp-GTC	scaffold_56	11216324	11216396	+	9	-26.4	66.5	0.631	14	0.022	0.633	-3.595	3	20
tRNA-Asp-GTC-2-5	active	0.989	Asp-GTC	scaffold_61	7252561	7252633	-	9	-26.4	66.5	1.397	15	0.075	0.745	-4.825	6	104
tRNA-Asp-GTC-2-6	active	0.971	Asp-GTC	scaffold_108	1788320	1788392	-	9	-26.4	66.5	0.355	11	0.089	0.915	-0.965	1	14
tRNA-Asp-GTC-2-7	active	0.982	Asp-GTC	scaffold_178	1195839	1195911	+	9	-26.4	66.5	1.513	8	0.093	1.063	-4.283	4	54
tRNA-Asp-GTC-3-1	active	0.972	Asp-GTC	scaffold_178	1193383	1193455	+	9	-26.4	66.5	0.331	11	0.100	0.771	-0.715	4	57
tRNA-Cys-GCA-1-1	active	0.969	Cys-GCA	scaffold_53	9978910	9978982	-	34	-26.1	81.9	1.547	10	0.047	0.901	-2.221	1	57
tRNA-Cys-GCA-1-2	active	0.943	Cys-GCA	scaffold_53	9979674	9979746	-	34	-26.1	81.9	1.538	10	0.031	0.526	-4.093	1	56
tRNA-Cys-GCA-10-1	inactive	-0.815	Cys-GCA	scaffold_53	9856031	9856103	+	34	-23.9	66.4	1.334	13	0.003	0.000	-3.272	1	76
tRNA-Cys-GCA-12-1	inactive	-0.952	Cys-GCA	scaffold_32	64788	64860	-	34	-21.9	70.9	0.174	11	0.016	0.217	-0.565	0	28
tRNA-Cys-GCA-13-1	inactive	-0.927	Cys-GCA	scaffold_32	25439	25511	-	34	-22.3	66.9	0.209	138	0.012	0.193	-0.001	6	11
tRNA-Cys-GCA-14-1	inactive	-0.946	Cys-GCA	scaffold_10	39847	39919	-	34	-23.5	63.9	0.249	12	0.005	0.089	-0.489	0	12
tRNA-Cys-GCA-15-1	inactive	-0.923	Cys-GCA	scaffold_32	44422	44494	-	34	-16.1	65.2	0.224	151	0.005	0.093	0.052	4	18
tRNA-Cys-GCA-16-1	inactive	-0.937	Cys-GCA	scaffold_32	50342	50415	-	34	-20.4	58	0.145	146	0.013	0.228	-0.230	2	18
tRNA-Cys-GCA-2-1	inactive	-0.715	Cys-GCA	scaffold_8	29449514	29449586	-	34	-24.6	81.8	1.215	174	0.008	0.305	-1.492	1	0
tRNA-Cys-GCA-3-1	inactive	-0.89	Cys-GCA	scaffold_10	142176	142248	+	34	-26.1	77.3	0.128	57	0.006	0.000	-1.734	1	24
tRNA-Cys-GCA-3-2	active	0.525	Cys-GCA	scaffold_10	148874	148946	+	34	-26.1	77.3	0.419	9	0.019	0.248	-2.161	1	22
tRNA-Cys-GCA-4-1	inactive	-0.651	Cys-GCA	scaffold_8	29452101	29452173	-	34	-24.6	77.2	1.271	12	0.010	0.400	-1.100	1	0
tRNA-Cys-GCA-5-1	inactive	-0.866	Cys-GCA	scaffold_53	9839836	9839908	-	34	-23.9	77.1	0.966	10	0.004	0.112	-2.885	0	90
tRNA-Cys-GCA-6-10	inactive	-0.792	Cys-GCA	scaffold_32	17235	17307	-	34	-28.1	79.5	0.209	138	0.014	0.216	-0.001	6	1
tRNA-Cys-GCA-6-13	inactive	-0.733	Cys-GCA	scaffold_32	30903	30975	-	34	-28.1	79.5	0.195	138	0.014	0.254	-0.001	6	17
tRNA-Cys-GCA-6-14	inactive	-0.733	Cys-GCA	scaffold_32	36362	36434	-	34	-28.1	79.5	0.172	138	0.014	0.251	-0.001	6	18
tRNA-Cys-GCA-6-15	inactive	-0.786	Cys-GCA	scaffold_32	41808	41880	-	34	-28.1	79.5	0.172	138	0.012	0.191	-0.001	5	18
tRNA-Cys-GCA-7-1	active	0.955	Cys-GCA	scaffold_53	9858003	9858075	-	34	-23.9	77.3	1.526	7	0.054	1.276	-1.781	1	75
tRNA-Cys-GCA-8-1	inactive	-0.775	Cys-GCA	scaffold_32	28173	28245	-	34	-28.1	77	0.177	138	0.014	0.251	-0.001	6	13
tRNA-Cys-GCA-9-1	inactive	-0.921	Cys-GCA	scaffold_10	19059	19131	+	34	-23	71.7	0.119	132	0.016	0.195	-0.185	3	9
tRNA-Gln-CTG-1-1	active	0.872	Gln-CTG	scaffold_61	8555434	8555506	-	10	-24.7	71.5	1.478	3	0.017	0.687	-4.803	3	94
tRNA-Gln-CTG-1-2	active	0.987	Gln-CTG	scaffold_101	1304343	1304415	+	10	-24.7	71.5	1.521	11	0.054	0.724	-2.526	0	23
tRNA-Gln-CTG-1-3	active	0.974	Gln-CTG	scaffold_108	1139093	1139165	+	10	-24.7	71.5	0.352	13	0.078	0.836	-1.061	5	15
tRNA-Gln-CTG-1-4	active	0.773	Gln-CTG	scaffold_108	1748817	1748889	+	10	-24.7	71.5	-0.218	4	0.063	0.802	-0.232	5	7
tRNA-Gln-CTG-2-1	active	0.589	Gln-CTG	scaffold_2	46460399	46460471	-	10	-24.2	71.1	-0.125	25	0.031	0.313	-1.119	0	18
tRNA-Gln-CTG-3-1	active	0.587	Gln-CTG	scaffold_2	46516011	46516083	+	10	-22	67.7	-0.157	25	0.026	0.270	-1.254	0	10
tRNA-Gln-CTG-4-1	active	0.963	Gln-CTG	scaffold_108	1674816	1674888	+	10	-22	66.9	0.280	10	0.030	0.571	-0.969	1	19
tRNA-Gln-CTG-5-1	inactive	-0.815	Gln-CTG	scaffold_2	47123908	47123980	+	10	-14	57.3	-0.264	32	0.014	0.333	-1.075	1	3
tRNA-Gln-CTG-6-1	inactive	-0.795	Gln-CTG	scaffold_2	46570448	46570524	-	10	-15.6	60	-0.238	32	0.012	0.267	-1.125	1	1
tRNA-Gln-CTG-7-1	inactive	-0.83	Gln-CTG	scaffold_2	46884416	46884487	-	10	-14.1	59.6	-0.241	32	0.005	0.118	-1.074	1	4
tRNA-Gln-TTG-1-1	active	0.973	Gln-TTG	scaffold_53	8311274	8311346	-	4	-27.1	72.6	1.629	9	0.096	0.910	0.143	0	51
tRNA-Gln-TTG-1-2	inactive	-0.729	Gln-TTG	scaffold_108	1256230	1256302	-	4	-27.1	72.6	0.441	14	0.013	0.194	-1.259	1	21
tRNA-Gln-TTG-2-1	inactive	-0.552	Gln-TTG	scaffold_38	20595455	20595527	-	4	-22	66.9	0.547	8	0.014	0.253	-2.502	5	14
tRNA-Gln-TTG-2-2	active	0.963	Gln-TTG	scaffold_108	1672963	1673035	+	4	-22	66.9	0.354	10	0.066	0.763	-0.733	1	19
tRNA-Glu-CTC-1-1	active	0.976	Glu-CTC	scaffold_1	23511483	23511555	+	5	-26.4	73.2	0.348	4	0.065	0.718	-0.827	1	41
tRNA-Glu-CTC-1-2	active	0.934	Glu-CTC	scaffold_2	46426623	46426695	+	5	-26.4	73.2	1.310	6	0.026	0.341	-3.414	3	33
tRNA-Glu-CTC-1-5	active	0.974	Glu-CTC	scaffold_108	1119562	1119634	-	5	-26.4	73.2	0.332	6	0.049	0.777	-0.879	1	15
tRNA-Glu-TTC-1-1	active	0.932	Glu-TTC	scaffold_2	46480661	46480733	+	6	-26.4	68.7	0.121	4	0.061	0.708	-0.612	3	16
tRNA-Glu-TTC-2-1	active	0.914	Glu-TTC	scaffold_56	11159231	11159303	+	6	-25.1	66.8	-0.108	8	0.034	0.712	-2.636	2	25
tRNA-Glu-TTC-3-1	active	0.935	Glu-TTC	scaffold_6	51660742	51660814	-	6	-24.8	70.4	1.461	11	0.119	1.158	-1.676	0	17
tRNA-Glu-TTC-4-1	active	0.983	Glu-TTC	scaffold_6	55159148	55159220	-	6	-26.7	71.2	1.618	8	0.073	1.106	-3.943	0	19
tRNA-Glu-TTC-4-2	active	0.95	Glu-TTC	scaffold_61	7442747	7442819	-	6	-26.7	71.2	0.354	8	0.038	0.678	-0.573	0	45
tRNA-Glu-TTC-4-3	active	0.957	Glu-TTC	scaffold_151	942793	942865	-	6	-26.7	71.2	1.351	10	0.079	1.063	-3.518	0	0
tRNA-Gly-CCC-1-1	inactive	-0.537	Gly-CCC	scaffold_2	10786078	10786149	-	5	-25.1	78.7	-0.162	42	0.019	0.188	-1.243	0	3
tRNA-Gly-CCC-2-1	active	0.985	Gly-CCC	scaffold_4	20610546	20610617	-	5	-31.4	75.1	1.274	7	0.060	0.641	-4.740	0	135
tRNA-Gly-CCC-2-2	active	0.882	Gly-CCC	scaffold_37	18471324	18471395	+	5	-31.4	75.1	1.391	7	0.036	0.162	-3.845	0	41
tRNA-Gly-CCC-3-1	inactive	-0.722	Gly-CCC	scaffold_4	5924039	5924110	+	5	-22.4	68	?	41	0.006	0.000	?	0	6
tRNA-Gly-CCC-4-1	inactive	-0.882	Gly-CCC	scaffold_2	20293523	20293594	-	5	-16.9	61.9	0.000	219	0.008	0.120	-0.014	0	0
tRNA-Gly-GCC-1-1	active	0.922	Gly-GCC	scaffold_3	31957287	31957358	+	11	-26.4	81	1.082	5	0.022	0.269	-4.141	1	11
tRNA-Gly-GCC-1-2	active	0.987	Gly-GCC	scaffold_22	2975476	2975547	-	11	-26.4	81	0.976	10	0.049	0.631	-4.339	1	68
tRNA-Gly-GCC-1-3	inactive	-0.734	Gly-GCC	scaffold_22	3398513	3398584	-	11	-26.4	81	0.793	6	0.013	0.082	-0.501	3	38
tRNA-Gly-GCC-1-4	inactive	-0.63	Gly-GCC	scaffold_22	3406777	3406848	+	11	-26.4	81	1.331	7	0.017	0.131	-0.912	3	38
tRNA-Gly-GCC-1-5	active	0.939	Gly-GCC	scaffold_38	20597718	20597789	-	11	-26.4	81	0.667	8	0.023	0.264	-3.484	4	14
tRNA-Gly-GCC-1-6	active	0.988	Gly-GCC	scaffold_56	11209655	11209726	-	11	-26.4	81	1.132	9	0.036	0.780	-3.400	2	18
tRNA-Gly-GCC-3-1	inactive	-0.675	Gly-GCC	scaffold_22	3397628	3397699	-	11	-21.5	72.8	0.263	5	0.017	0.276	0.053	3	37
tRNA-Gly-GCC-4-1	inactive	-0.781	Gly-GCC	scaffold_22	3407393	3407463	+	11	-24.6	65.2	1.266	9	0.013	0.088	0.128	3	38
tRNA-Gly-GCC-5-1	inactive	-0.844	Gly-GCC	scaffold_3	35991488	35991558	-	11	-22	60.7	?	351	0.017	0.162	0.051	0	22
tRNA-Gly-TCC-1-1	active	0.912	Gly-TCC	scaffold_2	46430007	46430079	+	6	-25.1	73.8	1.304	8	0.031	0.289	-3.301	3	31
tRNA-Gly-TCC-1-2	active	0.949	Gly-TCC	scaffold_56	11170965	11171037	-	6	-25.1	73.8	0.296	14	0.110	0.842	-0.359	6	23
tRNA-Gly-TCC-1-3	active	0.987	Gly-TCC	scaffold_61	7251873	7251945	+	6	-25.1	73.8	1.065	7	0.079	0.721	-2.662	6	104
tRNA-Gly-TCC-2-1	active	0.987	Gly-TCC	scaffold_334	419100	419172	-	6	-25.1	73.8	0.965	6	0.065	0.794	-4.290	1	41
tRNA-Gly-TCC-3-1	active	0.952	Gly-TCC	scaffold_56	11181221	11181293	-	6	-25.1	66.5	0.311	14	0.104	0.842	-0.359	7	21
tRNA-Gly-TCC-4-1	inactive	-0.774	Gly-TCC	scaffold_54	8575016	8575088	-	6	-19.2	66.3	?	326	0.005	0.087	?	0	10
tRNA-His-GTG-1-1	active	0.984	His-GTG	scaffold_2	46430826	46430898	+	7	-25.5	60.1	1.289	10	0.063	0.816	-1.195	3	31
tRNA-His-GTG-1-4	inactive	-0.799	His-GTG	scaffold_21	6237296	6237368	+	7	-25.5	60.1	0.931	13	0.016	0.095	-0.164	0	0
tRNA-His-GTG-1-5	active	0.969	His-GTG	scaffold_23	20500020	20500092	-	7	-25.5	60.1	1.499	34	0.057	0.767	0.433	2	93
tRNA-His-GTG-1-6	active	0.971	His-GTG	scaffold_23	20500800	20500872	-	7	-25.5	60.1	1.603	33	0.073	0.702	-0.147	2	92
tRNA-His-GTG-1-7	active	0.968	His-GTG	scaffold_23	20501392	20501464	+	7	-25.5	60.1	1.484	31	0.053	0.918	0.031	2	92
tRNA-Ile-AAT-1-1	active	0.979	Ile-AAT	scaffold_38	21199083	21199157	+	9	-25.5	81.2	1.390	6	0.044	0.425	-2.635	5	22
tRNA-Ile-AAT-1-2	active	0.913	Ile-AAT	scaffold_38	21331812	21331886	+	9	-25.5	81.2	-0.258	12	0.035	0.794	-0.927	3	12
tRNA-Ile-AAT-1-3	active	0.987	Ile-AAT	scaffold_61	7257647	7257721	-	9	-25.5	81.2	1.246	10	0.079	0.673	-3.480	6	103
tRNA-Ile-AAT-1-4	active	0.989	Ile-AAT	scaffold_61	8494951	8495025	-	9	-25.5	81.2	1.573	10	0.032	0.729	-5.276	2	74
tRNA-Ile-AAT-1-5	active	0.859	Ile-AAT	scaffold_108	1698852	1698926	-	9	-25.5	81.2	0.231	12	0.072	0.837	-0.803	8	15
tRNA-Ile-AAT-1-6	active	0.971	Ile-AAT	scaffold_108	1708332	1708406	-	9	-25.5	81.2	0.319	11	0.079	0.943	-0.854	6	13
tRNA-Ile-AAT-1-7	active	0.979	Ile-AAT	scaffold_108	1874030	1874104	+	9	-25.5	81.2	0.232	25	0.056	0.920	-1.108	1	28
tRNA-Ile-AAT-1-8	active	0.938	Ile-AAT	scaffold_111	2385499	2385573	+	9	-25.5	81.2	0.164	3	0.079	0.851	-0.424	0	48
tRNA-Ile-AAT-2-1	active	0.977	Ile-AAT	scaffold_108	1854140	1854213	-	9	-23.4	75.5	0.225	4	0.087	0.791	-0.827	2	33
tRNA-Ile-TAT-1-1	active	0.943	Ile-TAT	scaffold_52	12849603	12849696	-	5	-26.5	73.8	1.429	4	0.038	0.571	0.131	0	117
tRNA-Ile-TAT-2-1	active	0.959	Ile-TAT	scaffold_18	27159863	27159955	+	5	-32.2	73.2	1.416	6	0.109	1.042	0.214	0	26
tRNA-Ile-TAT-2-2	active	0.982	Ile-TAT	scaffold_38	21361896	21361988	+	5	-30.5	73.2	0.925	2	0.072	0.916	-1.893	0	12
tRNA-Ile-TAT-2-3	active	0.944	Ile-TAT	scaffold_108	1718633	1718727	-	5	-33.3	73.1	0.367	2	0.089	0.886	-0.048	2	14
tRNA-Ile-TAT-3-1	inactive	-0.561	Ile-TAT	scaffold_13	21450083	21450156	+	5	-24.7	67.4	0.317	9	0.016	0.000	-2.623	3	7
tRNA-Leu-AAG-1-1	active	0.953	Leu-AAG	scaffold_108	1137534	1137616	+	5	-31.4	72.9	0.274	5	0.070	0.769	-0.616	5	15
tRNA-Leu-AAG-2-1	active	0.951	Leu-AAG	scaffold_4	38736290	38736372	+	5	-30.7	74.8	1.543	8	0.019	0.487	-4.620	0	45
tRNA-Leu-AAG-2-2	active	0.978	Leu-AAG	scaffold_13	21257545	21257627	+	5	-30.7	74.8	0.235	8	0.041	0.511	-1.420	3	6
tRNA-Leu-AAG-2-3	active	0.981	Leu-AAG	scaffold_13	21460863	21460945	-	5	-30.7	74.8	1.225	6	0.061	0.944	-1.833	4	7
tRNA-Leu-AAG-2-4	active	0.917	Leu-AAG	scaffold_108	1310314	1310396	+	5	-30.7	74.8	0.356	4	0.123	1.027	-1.003	1	32
tRNA-Leu-CAA-1-1	active	0.974	Leu-CAA	scaffold_1	23511235	23511340	+	5	-41.3	77.3	0.310	8	0.073	0.770	-1.180	1	41
tRNA-Leu-CAA-1-2	active	0.951	Leu-CAA	scaffold_108	1139459	1139565	-	5	-39	77.3	0.345	6	0.076	0.944	-0.710	5	15
tRNA-Leu-CAA-1-3	active	0.96	Leu-CAA	scaffold_108	1156640	1156746	+	5	-39.9	77.3	0.327	6	0.097	1.095	-0.917	0	15
tRNA-Leu-CAA-1-4	active	0.774	Leu-CAA	scaffold_108	1728061	1728166	+	5	-38.7	77.3	0.184	12	0.043	0.202	-0.897	3	15
tRNA-Leu-CAA-2-1	active	0.954	Leu-CAA	scaffold_108	1739542	1739647	+	5	-36.2	78.7	0.116	8	0.058	0.780	-0.749	6	10
tRNA-Leu-CAG-1-1	active	0.985	Leu-CAG	scaffold_38	21166053	21166136	+	6	-35.7	78.2	1.221	7	0.047	0.913	-4.980	1	29
tRNA-Leu-CAG-2-1	active	0.981	Leu-CAG	scaffold_22	24776991	24777074	+	6	-32.8	77.3	1.419	9	0.063	1.090	-5.087	0	30
tRNA-Leu-CAG-2-2	active	0.987	Leu-CAG	scaffold_56	11214423	11214506	-	6	-32.8	77.3	1.008	7	0.033	0.958	-4.008	3	20
tRNA-Leu-TAA-1-1	active	0.888	Leu-TAA	scaffold_68	3120037	3120120	-	3	-32.3	88.7	1.309	6	0.091	0.949	-1.876	0	3
tRNA-Leu-TAA-2-1	active	0.928	Leu-TAA	scaffold_108	1885072	1885155	+	3	-31.4	84.1	0.306	18	0.047	0.682	-1.167	3	28
tRNA-Leu-TAA-3-1	active	0.892	Leu-TAA	scaffold_108	1695447	1695530	+	3	-33.5	90.8	0.333	7	0.051	0.567	-0.616	5	15
tRNA-Leu-TAG-1-1	active	0.954	Leu-TAG	scaffold_61	8554936	8555018	+	3	-33.3	75.2	1.601	9	0.036	0.616	-2.881	3	94
tRNA-Leu-TAG-2-1	active	0.941	Leu-TAG	scaffold_4	38648586	38648668	-	3	-30.8	73.9	1.479	17	0.037	0.907	-3.675	0	59
tRNA-Leu-TAG-3-1	active	0.557	Leu-TAG	scaffold_13	21454183	21454265	-	3	-29.2	73.7	0.895	8	0.014	0.290	-3.626	5	7
tRNA-Lys-CTT-1-1	active	0.989	Lys-CTT	scaffold_2	46431637	46431710	+	14	-28	87.8	1.136	4	0.045	0.677	-3.760	3	31
tRNA-Lys-CTT-1-2	active	0.988	Lys-CTT	scaffold_4	23152087	23152160	-	14	-28	87.8	0.463	5	0.044	0.601	-3.970	6	27
tRNA-Lys-CTT-1-3	active	0.984	Lys-CTT	scaffold_4	23163303	23163376	+	14	-28	87.8	0.243	3	0.047	0.566	-1.743	6	23
tRNA-Lys-CTT-1-4	active	0.956	Lys-CTT	scaffold_4	23172158	23172231	+	14	-28	87.8	0.189	8	0.041	0.558	-0.676	4	23
tRNA-Lys-CTT-1-5	active	0.988	Lys-CTT	scaffold_21	33807934	33808007	+	14	-28	87.8	1.113	9	0.038	0.522	-3.731	1	24
tRNA-Lys-CTT-1-6	active	0.851	Lys-CTT	scaffold_35	11129114	11129187	-	14	-28	87.8	-0.124	8	0.047	0.719	-0.685	0	17
tRNA-Lys-CTT-1-7	active	0.986	Lys-CTT	scaffold_38	21201079	21201152	-	14	-28	87.8	0.953	8	0.030	0.528	-4.106	6	22
tRNA-Lys-CTT-2-1	active	0.947	Lys-CTT	scaffold_20	2269275	2269348	+	14	-30.1	88	0.353	11	0.066	0.818	-0.573	0	45
tRNA-Lys-CTT-3-1	active	0.88	Lys-CTT	scaffold_4	23159497	23159570	-	14	-25.6	87.2	0.220	11	0.025	0.619	-0.649	7	24
tRNA-Lys-CTT-4-1	active	0.657	Lys-CTT	scaffold_109	213244	213317	-	14	-24.7	84.3	?	351	0.023	0.309	?	0	13
tRNA-Lys-CTT-5-1	active	0.506	Lys-CTT	scaffold_4	23161355	23161428	+	14	-27.1	83.8	0.243	5	0.016	0.061	-2.038	6	23
tRNA-Lys-CTT-6-1	active	0.703	Lys-CTT	scaffold_0	57908666	57908739	+	14	-24.2	75.2	?	122	0.025	0.328	?	0	0
tRNA-Lys-CTT-7-1	inactive	-0.955	Lys-CTT	scaffold_65	4580101	4580174	+	14	-19.1	66.9	0.000	248	0.006	0.000	0.000	0	67
tRNA-Lys-CTT-8-1	inactive	-0.748	Lys-CTT	scaffold_29	24987480	24987553	-	14	-25.9	67.1	?	61	0.004	0.092	?	0	3
tRNA-Lys-TTT-1-1	active	0.938	Lys-TTT	scaffold_12	18140051	18140124	+	11	-27.5	87.8	1.387	8	0.022	0.384	-2.753	1	42
tRNA-Lys-TTT-1-2	active	0.558	Lys-TTT	scaffold_12	18140455	18140528	-	11	-27.5	87.8	0.379	8	0.016	0.101	-2.324	1	42
tRNA-Lys-TTT-1-3	active	0.989	Lys-TTT	scaffold_61	8556454	8556527	-	11	-27.5	87.8	1.596	6	0.061	1.035	-4.116	3	94
tRNA-Lys-TTT-1-4	active	0.981	Lys-TTT	scaffold_86	371446	371519	+	11	-27.5	87.8	0.329	8	0.063	0.906	-1.027	6	40
tRNA-Lys-TTT-1-5	active	0.943	Lys-TTT	scaffold_108	1135405	1135478	-	11	-27.5	87.8	0.333	5	0.049	0.604	-0.657	5	15
tRNA-Lys-TTT-2-1	active	0.916	Lys-TTT	scaffold_108	1729929	1730002	+	11	-23.6	82.5	0.303	11	0.023	0.526	-0.724	4	14
tRNA-Lys-TTT-3-1	inactive	-0.746	Lys-TTT	scaffold_108	1828088	1828161	+	11	-25.7	81.8	0.236	10	0.010	0.114	-0.858	1	28
tRNA-Lys-TTT-4-1	inactive	-0.634	Lys-TTT	scaffold_101	4437676	4437749	-	11	-23.7	83.1	-0.252	60	0.009	0.072	?	0	0
tRNA-Lys-TTT-5-1	active	0.913	Lys-TTT	scaffold_86	372559	372632	-	11	-21.3	79.1	0.221	7	0.050	0.744	-0.664	6	40
tRNA-Lys-TTT-6-1	active	0.804	Lys-TTT	scaffold_108	1738709	1738782	-	11	-24.6	80.6	0.056	10	0.039	0.765	-0.484	5	10
tRNA-Lys-TTT-7-1	inactive	-0.788	Lys-TTT	scaffold_9	7997259	7997339	+	11	-26.2	60.3	-0.027	351	0.018	0.268	-0.246	0	2
tRNA-Met-CAT-1-1	active	0.93	Met-CAT	scaffold_108	1137239	1137312	-	15	-25.8	76.7	0.296	11	0.069	0.818	-0.242	5	15
tRNA-Met-CAT-2-1	active	0.943	Met-CAT	scaffold_434	102129	102202	-	15	-25	82.3	0.250	10	0.107	0.691	-0.616	0	36
tRNA-Met-CAT-3-1	active	0.974	Met-CAT	scaffold_108	1134745	1134818	+	15	-25.8	77.4	0.367	6	0.076	0.545	-1.041	5	15
tRNA-Met-CAT-4-1	active	0.857	Met-CAT	scaffold_51	12475769	12475842	+	15	-28	80.9	0.224	6	0.123	1.164	-0.120	0	36
tRNA-Met-CAT-5-1	active	0.929	Met-CAT	scaffold_38	21335209	21335282	-	15	-26.7	79.9	-0.142	4	0.030	0.810	-3.329	3	12
tRNA-Met-CAT-6-1	inactive	-0.906	Met-CAT	scaffold_106	2756194	2756267	-	15	-17.5	56.8	0.000	11	0.004	0.000	-0.133	0	2
tRNA-Met-CAT-7-1	inactive	-0.898	Met-CAT	scaffold_13	20577709	20577782	-	15	-17	61.4	0.026	6	0.004	0.174	-0.396	0	82
tRNA-Phe-GAA-1-1	active	0.985	Phe-GAA	scaffold_5	29155339	29155412	+	8	-21.9	88.9	1.047	5	0.079	0.960	-2.453	0	27
tRNA-Phe-GAA-1-2	active	0.935	Phe-GAA	scaffold_108	1119925	1119998	+	8	-21.9	88.9	0.366	11	0.069	0.874	-0.549	1	15
tRNA-Phe-GAA-1-3	active	0.978	Phe-GAA	scaffold_108	1709583	1709656	-	8	-21.9	88.9	0.328	14	0.050	0.758	-0.886	5	13
tRNA-Phe-GAA-1-4	active	0.949	Phe-GAA	scaffold_178	1195231	1195304	+	8	-21.9	88.9	0.353	5	0.083	0.992	-0.555	4	55
tRNA-Phe-GAA-1-5	active	0.979	Phe-GAA	scaffold_320	212946	213019	-	8	-21.9	88.9	0.650	19	0.047	1.105	-1.392	1	86
tRNA-Phe-GAA-2-1	active	0.522	Phe-GAA	scaffold_86	368528	368601	+	8	-21.9	87.9	0.179	351	0.014	0.161	-4.770	6	41
tRNA-Phe-GAA-2-2	active	0.952	Phe-GAA	scaffold_86	372135	372208	+	8	-21.9	87.9	0.218	2	0.041	0.728	-0.687	6	40
tRNA-Phe-GAA-3-1	inactive	-0.908	Phe-GAA	scaffold_14	31479429	31479502	+	8	-15.1	57	-0.074	102	0.009	0.120	0.036	0	19
tRNA-Pro-AGG-1-1	active	0.649	Pro-AGG	scaffold_4	23160919	23160991	-	8	-29.5	70.2	0.053	5	0.041	0.117	-0.423	6	23
tRNA-Pro-AGG-1-2	active	0.987	Pro-AGG	scaffold_4	23172706	23172778	+	8	-29.5	70.2	0.477	4	0.053	0.754	-4.141	4	23
tRNA-Pro-AGG-1-3	active	0.742	Pro-AGG	scaffold_11	49265630	49265702	+	8	-29.5	70.2	1.383	3	0.018	0.085	-1.460	0	93
tRNA-Pro-AGG-1-4	active	0.983	Pro-AGG	scaffold_13	21459185	21459257	+	8	-29.5	70.2	1.278	16	0.043	0.826	-4.575	5	7
tRNA-Pro-AGG-1-5	active	0.988	Pro-AGG	scaffold_38	21199796	21199868	+	8	-29.5	70.2	1.383	3	0.035	0.559	-4.216	6	22
tRNA-Pro-AGG-1-6	active	0.982	Pro-AGG	scaffold_39	4837652	4837724	-	8	-29.5	70.2	1.460	3	0.070	1.054	-4.082	1	13
tRNA-Pro-AGG-1-7	active	0.983	Pro-AGG	scaffold_40	18238775	18238847	-	8	-29.5	70.2	1.447	3	0.056	0.702	-4.775	1	9
tRNA-Pro-AGG-2-1	active	0.982	Pro-AGG	scaffold_13	21461514	21461586	+	8	-29.5	67.8	0.930	3	0.031	0.594	-3.060	4	7
tRNA-Pro-CGG-1-1	active	0.844	Pro-CGG	scaffold_4	23163464	23163536	-	3	-29.5	70.2	0.713	15	0.036	0.277	-1.038	6	23
tRNA-Pro-CGG-1-2	active	0.906	Pro-CGG	scaffold_39	4837132	4837204	+	3	-29.5	70.2	1.176	5	0.096	0.872	-1.026	1	13
tRNA-Pro-CGG-1-3	active	0.931	Pro-CGG	scaffold_61	7253194	7253266	-	3	-29.5	70.2	1.402	11	0.078	0.743	-2.982	6	104
tRNA-Pro-TGG-1-1	active	0.984	Pro-TGG	scaffold_4	23153084	23153156	+	4	-29.5	70.3	0.837	3	0.069	0.729	-5.226	6	27
tRNA-Pro-TGG-1-2	active	0.977	Pro-TGG	scaffold_13	21246387	21246459	-	4	-29.5	70.3	1.430	14	0.053	0.612	-3.332	2	6
tRNA-Pro-TGG-1-3	active	0.987	Pro-TGG	scaffold_21	33788665	33788737	-	4	-29.5	70.3	0.871	6	0.066	0.763	-3.027	2	33
tRNA-Pro-TGG-2-1	active	0.982	Pro-TGG	scaffold_40	18238479	18238551	+	4	-28.9	70.5	1.549	3	0.051	0.725	-4.346	1	9
tRNA-SeC-TCA-1-1	active	0.928	SeC-TCA	scaffold_80	5942270	5942357	-	1	-37.1	146.9	1.419	1	0.028	0.598	-4.803	0	71
tRNA-Ser-AGA-1-1	active	0.982	Ser-AGA	scaffold_0	20359309	20359391	+	8	-32.8	89.6	1.461	10	0.054	0.565	-0.823	0	7
tRNA-Ser-AGA-1-2	active	0.858	Ser-AGA	scaffold_38	20619216	20619298	+	8	-32.8	89.6	0.418	6	0.024	0.279	-1.051	5	10
tRNA-Ser-AGA-1-3	active	0.987	Ser-AGA	scaffold_61	7257249	7257331	-	8	-32.8	89.6	1.362	5	0.075	0.837	-5.023	6	103
tRNA-Ser-AGA-1-4	active	0.973	Ser-AGA	scaffold_108	1752619	1752701	+	8	-32.8	89.6	0.321	18	0.049	0.854	-0.777	5	7
tRNA-Ser-AGA-1-5	active	0.976	Ser-AGA	scaffold_108	1764413	1764495	-	8	-32.8	89.6	0.101	6	0.049	0.806	-0.855	2	9
tRNA-Ser-AGA-1-6	active	0.95	Ser-AGA	scaffold_108	1788564	1788646	-	8	-32.8	89.6	0.344	4	0.084	0.811	-0.657	1	14
tRNA-Ser-AGA-2-1	active	0.978	Ser-AGA	scaffold_108	1745174	1745256	+	8	-32.8	89	0.348	4	0.061	0.928	-1.141	6	7
tRNA-Ser-AGA-2-2	active	0.978	Ser-AGA	scaffold_108	1760604	1760686	-	8	-32.8	89	0.313	18	0.069	0.919	-1.382	4	9
tRNA-Ser-CGA-1-1	active	0.984	Ser-CGA	scaffold_61	8537372	8537454	+	4	-34	95.1	1.590	7	0.049	0.816	-0.986	1	80
tRNA-Ser-CGA-2-1	active	0.937	Ser-CGA	scaffold_108	1706773	1706855	+	4	-34	94	0.174	6	0.087	0.962	-0.593	6	12
tRNA-Ser-CGA-2-2	active	0.97	Ser-CGA	scaffold_108	1888849	1888931	-	4	-34	94	0.101	8	0.092	0.903	-0.757	4	28
tRNA-Ser-CGA-3-1	active	0.982	Ser-CGA	scaffold_9	42005040	42005122	-	4	-29.8	89.6	1.573	7	0.066	0.764	-0.729	0	147
tRNA-Ser-GCT-1-1	active	0.981	Ser-GCT	scaffold_38	20591093	20591175	-	10	-32.8	91.9	1.356	29	0.038	0.542	-2.659	6	16
tRNA-Ser-GCT-1-2	active	0.923	Ser-GCT	scaffold_108	1254869	1254951	+	10	-32.8	91.9	0.300	9	0.098	1.123	-0.513	1	21
tRNA-Ser-GCT-2-1	active	0.987	Ser-GCT	scaffold_42	6973572	6973654	+	10	-30.7	89.1	1.619	6	0.045	0.686	-2.685	0	89
tRNA-Ser-GCT-3-1	active	0.985	Ser-GCT	scaffold_10	26279172	26279254	-	10	-30.7	88.4	1.544	12	0.054	0.937	-1.197	0	44
tRNA-Ser-GCT-3-2	active	0.988	Ser-GCT	scaffold_61	8495817	8495899	-	10	-30.7	88.4	1.603	28	0.049	0.797	-3.724	2	76
tRNA-Ser-GCT-4-1	active	0.981	Ser-GCT	scaffold_108	1922683	1922765	-	10	-34.8	90	0.289	9	0.066	0.984	-0.790	0	22
tRNA-Ser-GCT-5-1	active	0.903	Ser-GCT	scaffold_108	1852802	1852884	-	10	-32.8	91.3	0.109	88	0.028	0.573	-0.710	2	33
tRNA-Ser-GCT-6-1	active	0.981	Ser-GCT	scaffold_108	1440604	1440686	-	10	-32.8	91.9	0.333	11	0.061	0.930	-0.845	0	37
tRNA-Ser-TGA-1-1	active	0.827	Ser-TGA	scaffold_38	20596753	20596835	-	3	-32.8	89.7	1.342	8	0.018	0.281	-3.439	5	14
tRNA-Ser-TGA-1-2	active	0.906	Ser-TGA	scaffold_108	1751518	1751600	-	3	-32.8	89.7	0.318	1	0.093	0.909	-0.849	6	7
tRNA-Ser-TGA-2-1	active	0.926	Ser-TGA	scaffold_15	17643719	17643801	+	3	-34.9	94	1.519	15	0.052	0.830	-2.618	0	8
tRNA-Sup-CTA-1-1	inactive	-0.817	Sup-CTA	scaffold_2	10757434	10757506	-	1	-14	59.4	-0.295	32	0.006	0.127	-1.297	1	2
tRNA-Sup-TTA-1-1	inactive	-0.718	Sup-TTA	scaffold_20	11603178	11603249	+	1	-18.7	51.2	?	61	0.003	0.000	?	0	3
tRNA-Thr-AGT-1-1	active	0.985	Thr-AGT	scaffold_52	10000383	10000457	+	8	-27.3	82.6	1.551	28	0.063	0.917	-1.487	0	42
tRNA-Thr-AGT-2-1	active	0.986	Thr-AGT	scaffold_61	7256888	7256962	-	8	-25.1	80.3	1.311	32	0.048	0.763	-3.361	6	103
tRNA-Thr-AGT-3-1	active	0.981	Thr-AGT	scaffold_38	21174428	21174502	-	8	-27	81.4	1.545	0	0.025	0.603	-3.679	3	30
tRNA-Thr-AGT-4-1	active	0.846	Thr-AGT	scaffold_108	1699382	1699456	+	8	-27	80.4	0.352	27	0.053	0.919	-0.692	8	15
tRNA-Thr-AGT-5-1	active	0.959	Thr-AGT	scaffold_61	8536922	8536996	+	8	-27.3	79.1	1.255	96	0.049	0.596	-4.116	1	80
tRNA-Thr-AGT-6-1	active	0.957	Thr-AGT	scaffold_108	1194793	1194867	-	8	-30	82.2	0.088	35	0.076	0.608	-0.717	5	17
tRNA-Thr-AGT-7-1	active	0.987	Thr-AGT	scaffold_108	1898918	1898992	-	8	-27.8	79.7	1.387	16	0.053	0.930	-2.253	2	28
tRNA-Thr-AGT-8-1	inactive	-0.871	Thr-AGT	scaffold_29	10782018	10782090	+	8	-8.6	60.9	-0.286	195	0.003	0.176	-0.335	0	0
tRNA-Thr-CGT-1-1	active	0.912	Thr-CGT	scaffold_108	1219580	1219654	-	3	-26.5	77.7	0.961	18	0.081	1.022	-2.753	1	23
tRNA-Thr-CGT-2-1	active	0.877	Thr-CGT	scaffold_32	15074014	15074086	-	3	-27.3	78.3	1.222	62	0.092	0.864	0.151	0	16
tRNA-Thr-CGT-3-1	active	0.885	Thr-CGT	scaffold_4	33113996	33114068	+	3	-27	74	1.521	32	0.100	1.122	-0.107	0	20
tRNA-Thr-TGT-1-1	active	0.929	Thr-TGT	scaffold_108	1312654	1312728	+	4	-26.6	79.6	0.384	4	0.079	1.066	-0.136	1	34
tRNA-Thr-TGT-2-1	active	0.98	Thr-TGT	scaffold_13	21458796	21458869	+	4	-29.7	78.8	1.276	7	0.039	0.481	-3.457	5	7
tRNA-Thr-TGT-2-2	active	0.986	Thr-TGT	scaffold_21	33791681	33791754	-	4	-29.7	78.8	1.457	6	0.078	0.775	-3.023	2	33
tRNA-Thr-TGT-3-1	active	0.976	Thr-TGT	scaffold_13	21250690	21250763	-	4	-30.4	78	1.388	27	0.052	0.449	-4.693	3	6
tRNA-Trp-CCA-1-1	active	0.915	Trp-CCA	scaffold_38	20611431	20611503	-	8	-25.1	73.3	0.782	11	0.027	0.425	-0.865	5	12
tRNA-Trp-CCA-2-1	active	0.986	Trp-CCA	scaffold_71	511998	512070	+	8	-25.1	75.1	1.281	7	0.093	0.981	-2.466	0	60
tRNA-Trp-CCA-3-1	active	0.988	Trp-CCA	scaffold_61	7251228	7251300	-	8	-24.5	73.4	1.077	13	0.044	0.781	-3.907	6	104
tRNA-Trp-CCA-3-2	active	0.966	Trp-CCA	scaffold_61	8496255	8496327	-	8	-24.5	73.4	1.526	5	0.076	0.728	-0.335	2	76
tRNA-Trp-CCA-4-1	inactive	-0.782	Trp-CCA	scaffold_30	5417919	5417991	-	8	-25.8	74.9	0.489	12	0.013	0.180	-1.242	0	42
tRNA-Trp-CCA-5-1	active	0.968	Trp-CCA	scaffold_9	3669427	3669499	-	8	-25.1	74.3	1.590	10	0.054	0.783	0.652	1	16
tRNA-Trp-CCA-6-1	active	0.603	Trp-CCA	scaffold_6	18649825	18649897	+	8	-24.5	68.8	1.534	5	0.031	0.198	-0.243	0	0
tRNA-Trp-CCA-7-1	active	0.984	Trp-CCA	scaffold_38	20621060	20621132	-	8	-29.4	65.6	1.240	28	0.044	0.636	-2.531	5	10
tRNA-Tyr-GTA-1-1	active	0.987	Tyr-GTA	scaffold_38	21205525	21205613	+	15	-32.1	78	1.545	8	0.053	0.874	-3.144	7	23
tRNA-Tyr-GTA-1-2	active	0.986	Tyr-GTA	scaffold_38	21209192	21209281	+	15	-27.7	78	0.630	7	0.030	0.530	-2.432	5	24
tRNA-Tyr-GTA-1-3	active	0.982	Tyr-GTA	scaffold_38	21212346	21212434	+	15	-28.1	78	0.781	7	0.028	0.538	-1.431	3	25
tRNA-Tyr-GTA-2-1	active	0.988	Tyr-GTA	scaffold_18	8901866	8901955	+	15	-30.6	77.9	1.615	11	0.067	0.808	-3.850	1	87
tRNA-Tyr-GTA-3-1	active	0.987	Tyr-GTA	scaffold_0	46309497	46309586	-	15	-33.3	75.5	1.190	12	0.068	0.870	-3.649	2	19
tRNA-Tyr-GTA-3-2	active	0.966	Tyr-GTA	scaffold_13	21249752	21249843	-	15	-30	75.4	0.887	10	0.076	1.174	-3.605	3	6
tRNA-Tyr-GTA-3-3	active	0.932	Tyr-GTA	scaffold_13	21265438	21265532	+	15	-31.8	75.3	0.246	12	0.093	0.792	-0.520	1	6
tRNA-Tyr-GTA-4-1	active	0.934	Tyr-GTA	scaffold_13	21412988	21413082	+	15	-28.9	70.9	0.246	12	0.094	0.813	-0.520	5	7
tRNA-Tyr-GTA-4-2	active	0.918	Tyr-GTA	scaffold_3118	2717	2811	+	15	-28.9	70.9	0.246	12	0.091	0.777	-0.520	0	0
tRNA-Tyr-GTA-5-1	active	0.933	Tyr-GTA	scaffold_13	21406791	21406885	+	15	-29.4	70.6	0.208	12	0.093	0.803	-0.520	5	6
tRNA-Tyr-GTA-6-1	active	0.924	Tyr-GTA	scaffold_13	21416113	21416207	+	15	-26.5	66.3	0.230	12	0.099	0.830	-0.520	4	7
tRNA-Tyr-GTA-7-1	active	0.931	Tyr-GTA	scaffold_13	21403706	21403800	+	15	-27.6	62.4	0.246	12	0.092	0.789	-0.520	4	6
tRNA-Val-AAC-1-1	active	0.987	Val-AAC	scaffold_21	33788337	33788410	-	6	-24.7	79.4	0.183	19	0.071	0.928	-4.261	2	33
tRNA-Val-AAC-1-2	active	0.988	Val-AAC	scaffold_100	2300007	2300080	+	6	-24.7	79.4	1.466	2	0.041	0.723	-5.607	0	29
tRNA-Val-AAC-1-3	active	0.984	Val-AAC	scaffold_108	1689670	1689743	+	6	-24.7	79.4	0.285	15	0.053	0.751	-1.438	4	15
tRNA-Val-AAC-1-4	active	0.81	Val-AAC	scaffold_108	1703125	1703198	+	6	-24.7	79.4	0.161	14	0.067	0.994	-0.161	8	12
tRNA-Val-AAC-1-5	active	0.978	Val-AAC	scaffold_108	1883382	1883455	-	6	-24.7	79.4	0.258	14	0.054	0.859	-1.091	4	27
tRNA-Val-AAC-2-1	active	0.945	Val-AAC	scaffold_38	21339270	21339343	-	6	-26.9	79.1	0.309	8	0.043	0.700	-0.351	3	13
tRNA-Val-CAC-1-1	active	0.987	Val-CAC	scaffold_21	33827050	33827123	-	6	-24.7	79.4	1.319	2	0.057	1.016	-3.060	0	23
tRNA-Val-CAC-1-2	active	0.989	Val-CAC	scaffold_38	21178579	21178652	+	6	-24.7	79.4	1.318	2	0.074	0.669	-3.715	2	30
tRNA-Val-CAC-1-3	active	0.987	Val-CAC	scaffold_56	11153263	11153336	-	6	-24.7	79.4	1.016	9	0.041	0.512	-2.413	1	27
tRNA-Val-CAC-1-4	active	0.765	Val-CAC	scaffold_108	1694643	1694716	+	6	-24.7	79.4	-0.067	5	0.072	0.786	0.000	5	15
tRNA-Val-CAC-2-1	active	0.984	Val-CAC	scaffold_334	418808	418881	+	6	-22.5	80.4	0.189	7	0.048	0.920	-2.146	1	41
tRNA-Val-CAC-3-1	active	0.971	Val-CAC	scaffold_108	1891636	1891711	+	6	-25.4	69.5	0.368	7	0.072	0.505	-0.735	4	28
tRNA-Val-TAC-1-1	active	0.929	Val-TAC	scaffold_59	1393046	1393119	-	3	-23.6	82.9	1.240	24	0.043	0.733	-5.240	0	25
tRNA-Val-TAC-2-1	active	0.894	Val-TAC	scaffold_86	374859	374932	+	3	-23.6	80.5	0.346	16	0.072	0.851	-0.563	6	39
tRNA-Val-TAC-2-2	active	0.913	Val-TAC	scaffold_86	375166	375239	+	3	-23.6	80.5	0.354	7	0.093	0.991	-0.871	6	40
tRNA-iMet-CAT-1-1	active	0.984	iMet-CAT	scaffold_10	14659221	14659293	+	15	-26.1	60.4	1.610	14	0.025	0.511	-4.298	0	93
tRNA-iMet-CAT-1-2	active	0.876	iMet-CAT	scaffold_38	20582414	20582486	+	15	-26.1	60.4	0.723	5	0.023	0.413	-0.881	2	18
tRNA-iMet-CAT-1-3	active	0.985	iMet-CAT	scaffold_38	20597252	20597324	-	15	-26.1	60.4	1.056	4	0.027	0.615	-2.167	4	14
tRNA-iMet-CAT-1-4	active	0.984	iMet-CAT	scaffold_108	1613199	1613271	+	15	-26.1	60.4	1.235	11	0.057	0.763	-1.585	0	22
tRNA-iMet-CAT-1-5	active	0.968	iMet-CAT	scaffold_108	1759654	1759726	+	15	-26.1	60.4	0.320	6	0.082	0.933	-1.015	4	9
tRNA-iMet-CAT-1-6	active	0.971	iMet-CAT	scaffold_108	1829969	1830041	+	15	-26.1	60.4	0.336	3	0.070	0.735	-0.751	1	29
tRNA-iMet-CAT-2-1	active	0.947	iMet-CAT	scaffold_108	1729603	1729675	+	15	-26.1	60.2	0.202	49	0.078	1.033	-0.872	4	14
tRNA-iMet-CAT-3-1	inactive	-0.501	iMet-CAT	scaffold_38	20620245	20620317	-	15	-24.3	50.5	0.316	5	0.019	0.279	-1.183	5	10

Inquiries should be directed to Bryan Thornlow
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