Cavia porcellus tRNA Activity Predictions
These data were created using the tRAP pipeline detailed in the manuscript Predicting transfer RNA gene activity from sequence and genome context.
Column Explanations:
tRNA Name: The name of the tRNA gene as you would find in GtRNAdb or after running tRNAscan-SE.
Prediction: Whether the tRNA gene is predicted as active in at least one tissue or inactive by tRAP.
Probability: The probability score output by tRAP to inform the prediction. Scores are negative if predicted as inactive. Closer to 1.0 or -1.0 indicates a stronger prediction.
tRNA Genes With Same Anticodon: The total number of tRNA genes in the genome that have the same anticodon as this tRNA gene.
Minimum Free Energy: Minimum Free Energy of the tRNA gene as predicted by RNAfold using the secondary structure output by tRNAscan-SE.
tRNAscan-SE Bit Score: The general bit score for this tRNA gene output by tRNAscan-SE.
tRNA phyloP Score: Average phyloP score in 29-way placental mammal alignment across the tRNA gene sequence.
PolyT Distance: Distance to the nearest TTTT transcription termination sequence 3' of the tRNA gene.
CpG Density: Number of observed CpG dinucleotides divided by total nucleotides for the region spanning from 350 nt 5' to 350 nt 3' of the tRNA gene.
CpG Islands Score: Number of observed CpG dinucleotides divided by the product of the observed C and the observed G nts for the region spanning from 350 nt 5' of the tRNA gene to 1 nt 5' of the tRNA gene.
5' Flank phyloP Score: Average phyloP score in 29-way placental mammal alignment across the 20 nt directly 5' of the tRNA gene sequence.
tRNA Genes Within 10 Kb: Number of other tRNA genes within 10,000 nt in either direction of the tRNA gene.
Exons Within 75 Kb: Number of exons within 75,000 nt in either direction of the tRNA gene.
tRNA Name |
Prediction |
Probability |
Isotype & Anticodon |
Chromosome |
Start |
End |
Strand |
tRNA Genes With Same Anticodon |
Minimum Free Energy |
tRNAscan-SE Bit Score |
tRNA phyloP Score |
PolyT Distance |
CpG Density |
CpG Islands Score |
5' Flank phyloP Score |
tRNA Genes Within 10 Kb |
Exons Within 75 Kb |
tRNA-Ala-AGC-7-2 |
active |
0.979 |
Ala-AGC |
scaffold_18 |
8902297 |
8902370 |
+ |
19 |
-32 |
59.7 |
1.566 |
6 |
0.089 |
0.962 |
-2.516 |
1 |
87 |
tRNA-Ala-AGC-7-1 |
active |
0.974 |
Ala-AGC |
scaffold_0 |
46309309 |
46309382 |
- |
19 |
-32 |
59.7 |
1.611 |
1 |
0.056 |
1.099 |
-1.183 |
2 |
19 |
tRNA-Ala-AGC-8-1 |
active |
0.96 |
Ala-AGC |
scaffold_38 |
21206825 |
21206898 |
- |
19 |
-29.6 |
58.9 |
1.066 |
1 |
0.038 |
0.527 |
-2.784 |
7 |
23 |
tRNA-Ala-AGC-1-2 |
active |
0.923 |
Ala-AGC |
scaffold_108 |
1190504 |
1190576 |
+ |
19 |
-30.4 |
85.3 |
0.282 |
50 |
0.088 |
0.809 |
-0.453 |
5 |
17 |
tRNA-Ala-AGC-3-2 |
active |
0.921 |
Ala-AGC |
scaffold_108 |
1181506 |
1181578 |
+ |
19 |
-31.9 |
84.7 |
0.247 |
1 |
0.110 |
0.825 |
-0.338 |
3 |
15 |
tRNA-Ala-AGC-2-2 |
active |
0.914 |
Ala-AGC |
scaffold_108 |
1241049 |
1241121 |
- |
19 |
-31.9 |
85.8 |
0.195 |
65 |
0.056 |
0.835 |
-0.595 |
3 |
20 |
tRNA-Ala-AGC-1-1 |
active |
0.889 |
Ala-AGC |
scaffold_108 |
1183453 |
1183525 |
+ |
19 |
-30.4 |
85.3 |
0.272 |
58 |
0.027 |
0.693 |
-0.632 |
4 |
16 |
tRNA-Ala-AGC-6-1 |
active |
0.81 |
Ala-AGC |
scaffold_42 |
8540810 |
8540883 |
- |
19 |
-27.7 |
55.7 |
0.766 |
8 |
0.038 |
0.739 |
-2.162 |
0 |
26 |
tRNA-Ala-AGC-4-1 |
active |
0.798 |
Ala-AGC |
scaffold_108 |
1205721 |
1205793 |
+ |
19 |
-30.4 |
80.8 |
-0.204 |
17 |
0.056 |
0.841 |
0.000 |
3 |
21 |
tRNA-Ala-AGC-2-1 |
active |
0.766 |
Ala-AGC |
scaffold_108 |
1201354 |
1201426 |
- |
19 |
-31.9 |
85.8 |
-0.030 |
68 |
0.065 |
0.824 |
-0.132 |
5 |
21 |
tRNA-Ala-AGC-3-1 |
active |
0.751 |
Ala-AGC |
scaffold_22 |
2968397 |
2968469 |
+ |
19 |
-31.9 |
84.7 |
0.282 |
178 |
0.023 |
0.438 |
-0.710 |
1 |
71 |
tRNA-Ala-AGC-9-1 |
active |
0.751 |
Ala-AGC |
scaffold_38 |
21338831 |
21338904 |
- |
19 |
-28.6 |
54.4 |
0.172 |
4 |
0.036 |
0.776 |
-0.809 |
3 |
13 |
tRNA-Ala-AGC-5-1 |
active |
0.676 |
Ala-AGC |
scaffold_108 |
1200858 |
1200930 |
- |
19 |
-21.8 |
70.4 |
-0.061 |
68 |
0.034 |
0.698 |
0.000 |
5 |
21 |
tRNA-Ala-AGC-14-1 |
active |
0.547 |
Ala-AGC |
scaffold_108 |
1240839 |
1240911 |
- |
19 |
-20 |
56.6 |
0.000 |
122 |
0.031 |
0.720 |
-0.662 |
3 |
20 |
tRNA-Ala-AGC-13-1 |
inactive |
-0.795 |
Ala-AGC |
scaffold_4 |
4510756 |
4510830 |
- |
19 |
-8.5 |
65.6 |
? |
69 |
0.004 |
0.000 |
? |
0 |
0 |
tRNA-Ala-AGC-11-1 |
inactive |
-0.876 |
Ala-AGC |
scaffold_20 |
9293072 |
9293144 |
- |
19 |
-26.2 |
66 |
-0.187 |
242 |
0.013 |
0.241 |
-0.124 |
0 |
14 |
tRNA-Ala-AGC-15-1 |
inactive |
-0.9 |
Ala-AGC |
scaffold_184 |
401746 |
401818 |
- |
19 |
-12.5 |
61.4 |
-0.148 |
351 |
0.008 |
0.265 |
-0.460 |
0 |
102 |
tRNA-Ala-AGC-10-1 |
inactive |
-0.933 |
Ala-AGC |
scaffold_65 |
1710641 |
1710714 |
+ |
19 |
-22.9 |
66.1 |
0.000 |
69 |
0.012 |
0.166 |
0.000 |
0 |
41 |
tRNA-Ala-AGC-12-1 |
inactive |
-0.949 |
Ala-AGC |
scaffold_101 |
2628204 |
2628276 |
+ |
19 |
-18.6 |
52.9 |
-0.071 |
351 |
0.004 |
0.103 |
-0.159 |
0 |
7 |
tRNA-Ala-CGC-2-1 |
active |
0.982 |
Ala-CGC |
scaffold_38 |
21198493 |
21198565 |
+ |
5 |
-26.5 |
79.7 |
1.405 |
8 |
0.025 |
0.576 |
-3.877 |
5 |
22 |
tRNA-Ala-CGC-3-1 |
active |
0.982 |
Ala-CGC |
scaffold_3 |
31957609 |
31957681 |
- |
5 |
-27.6 |
74.4 |
1.602 |
18 |
0.044 |
0.725 |
-2.378 |
1 |
11 |
tRNA-Ala-CGC-4-1 |
active |
0.946 |
Ala-CGC |
scaffold_108 |
1192210 |
1192282 |
- |
5 |
-25.7 |
78 |
0.211 |
6 |
0.096 |
0.981 |
-0.461 |
6 |
17 |
tRNA-Ala-CGC-5-1 |
active |
0.797 |
Ala-CGC |
scaffold_108 |
1233476 |
1233548 |
- |
5 |
-32.1 |
78.3 |
0.000 |
18 |
0.070 |
0.820 |
0.000 |
3 |
20 |
tRNA-Ala-CGC-1-1 |
inactive |
-0.605 |
Ala-CGC |
scaffold_27 |
27055708 |
27055780 |
+ |
5 |
-30.4 |
84.2 |
0.200 |
16 |
0.008 |
0.049 |
-0.308 |
0 |
0 |
tRNA-Ala-TGC-1-1 |
active |
0.988 |
Ala-TGC |
scaffold_21 |
33807425 |
33807497 |
+ |
10 |
-26.5 |
79.7 |
1.351 |
6 |
0.036 |
0.581 |
-3.758 |
1 |
25 |
tRNA-Ala-TGC-1-2 |
active |
0.986 |
Ala-TGC |
scaffold_178 |
1196806 |
1196878 |
+ |
10 |
-26.5 |
79.7 |
1.322 |
5 |
0.038 |
0.591 |
-1.083 |
4 |
54 |
tRNA-Ala-TGC-2-2 |
active |
0.979 |
Ala-TGC |
scaffold_178 |
1193113 |
1193185 |
- |
10 |
-26.5 |
78.7 |
0.244 |
1 |
0.101 |
0.953 |
-0.988 |
4 |
57 |
tRNA-Ala-TGC-2-1 |
active |
0.944 |
Ala-TGC |
scaffold_108 |
1236117 |
1236189 |
+ |
10 |
-26.5 |
78.7 |
0.256 |
23 |
0.069 |
0.850 |
-0.531 |
3 |
20 |
tRNA-Ala-TGC-3-1 |
active |
0.931 |
Ala-TGC |
scaffold_108 |
1212224 |
1212296 |
+ |
10 |
-28.2 |
78.3 |
0.109 |
62 |
0.025 |
0.463 |
-2.090 |
2 |
25 |
tRNA-Ala-TGC-4-1 |
active |
0.927 |
Ala-TGC |
scaffold_108 |
1193576 |
1193648 |
- |
10 |
-31.7 |
78.2 |
0.246 |
11 |
0.021 |
0.572 |
-0.962 |
5 |
17 |
tRNA-Ala-TGC-8-1 |
inactive |
-0.87 |
Ala-TGC |
scaffold_20 |
15834515 |
15834586 |
+ |
10 |
-13.3 |
55.8 |
0.000 |
9 |
0.000 |
0.000 |
0.000 |
0 |
10 |
tRNA-Ala-TGC-5-1 |
inactive |
-0.893 |
Ala-TGC |
scaffold_2 |
34673911 |
34673983 |
- |
10 |
-8.2 |
61.3 |
-0.030 |
351 |
0.003 |
0.056 |
-1.015 |
0 |
4 |
tRNA-Ala-TGC-6-1 |
inactive |
-0.913 |
Ala-TGC |
scaffold_25 |
11925451 |
11925523 |
+ |
10 |
-22.7 |
56.4 |
0.000 |
187 |
0.013 |
0.292 |
-0.070 |
0 |
23 |
tRNA-Ala-TGC-7-1 |
inactive |
-0.92 |
Ala-TGC |
scaffold_41 |
14596357 |
14596430 |
- |
10 |
-10.6 |
62.1 |
-0.075 |
147 |
0.001 |
0.102 |
-0.315 |
0 |
27 |
tRNA-Arg-ACG-2-2 |
active |
0.989 |
Arg-ACG |
scaffold_38 |
21177942 |
21178015 |
+ |
7 |
-25.4 |
67.6 |
1.276 |
15 |
0.053 |
0.716 |
-2.675 |
2 |
30 |
tRNA-Arg-ACG-1-1 |
active |
0.986 |
Arg-ACG |
scaffold_0 |
46310495 |
46310568 |
+ |
7 |
-26.3 |
64.9 |
0.692 |
3 |
0.060 |
0.798 |
-2.041 |
2 |
19 |
tRNA-Arg-ACG-3-1 |
active |
0.986 |
Arg-ACG |
scaffold_7 |
46626356 |
46626429 |
- |
7 |
-23.1 |
64.2 |
1.482 |
9 |
0.070 |
1.017 |
-3.245 |
0 |
55 |
tRNA-Arg-ACG-3-3 |
active |
0.972 |
Arg-ACG |
scaffold_108 |
1707561 |
1707634 |
+ |
7 |
-23.1 |
64.2 |
0.214 |
11 |
0.057 |
0.674 |
-0.770 |
6 |
13 |
tRNA-Arg-ACG-2-1 |
active |
0.958 |
Arg-ACG |
scaffold_13 |
17849288 |
17849361 |
- |
7 |
-25.4 |
67.6 |
1.606 |
63 |
0.041 |
0.759 |
-3.353 |
0 |
71 |
tRNA-Arg-ACG-3-4 |
active |
0.941 |
Arg-ACG |
scaffold_108 |
1856572 |
1856645 |
+ |
7 |
-23.1 |
64.2 |
0.406 |
6 |
0.072 |
0.586 |
-0.316 |
2 |
34 |
tRNA-Arg-ACG-3-2 |
active |
0.657 |
Arg-ACG |
scaffold_38 |
20619650 |
20619723 |
+ |
7 |
-23.1 |
64.2 |
-0.053 |
9 |
0.026 |
0.657 |
-0.626 |
5 |
10 |
tRNA-Arg-CCG-2-1 |
active |
0.943 |
Arg-CCG |
scaffold_4 |
23148062 |
23148135 |
+ |
3 |
-26.3 |
64.1 |
1.332 |
12 |
0.052 |
0.786 |
-5.309 |
3 |
27 |
tRNA-Arg-CCG-1-1 |
active |
0.895 |
Arg-CCG |
scaffold_108 |
1178041 |
1178114 |
- |
3 |
-27.1 |
67 |
0.354 |
3 |
0.082 |
0.941 |
-0.553 |
2 |
15 |
tRNA-Arg-CCG-3-1 |
active |
0.889 |
Arg-CCG |
scaffold_65 |
5789718 |
5789791 |
+ |
3 |
-29 |
64.9 |
1.634 |
8 |
0.062 |
1.062 |
0.272 |
0 |
28 |
tRNA-Arg-CCT-2-1 |
active |
0.979 |
Arg-CCT |
scaffold_4 |
23175544 |
23175617 |
+ |
5 |
-32.1 |
72.3 |
0.783 |
33 |
0.027 |
0.616 |
-2.197 |
2 |
24 |
tRNA-Arg-CCT-3-1 |
active |
0.979 |
Arg-CCT |
scaffold_4 |
23150727 |
23150800 |
+ |
5 |
-30.6 |
71.7 |
0.909 |
13 |
0.023 |
0.715 |
-2.785 |
4 |
27 |
tRNA-Arg-CCT-4-1 |
active |
0.978 |
Arg-CCT |
scaffold_10 |
9150809 |
9150882 |
- |
5 |
-27.2 |
65.6 |
1.607 |
6 |
0.066 |
1.130 |
-1.189 |
0 |
27 |
tRNA-Arg-CCT-1-2 |
active |
0.958 |
Arg-CCT |
scaffold_76 |
192313 |
192386 |
- |
5 |
-32.1 |
71.1 |
1.262 |
52 |
0.053 |
0.541 |
-3.197 |
2 |
72 |
tRNA-Arg-CCT-1-1 |
active |
0.947 |
Arg-CCT |
scaffold_76 |
190953 |
191026 |
- |
5 |
-32.1 |
71.1 |
1.019 |
11 |
0.034 |
0.818 |
-0.158 |
2 |
72 |
tRNA-Arg-TCG-1-1 |
active |
0.983 |
Arg-TCG |
scaffold_10 |
34687829 |
34687902 |
- |
4 |
-29.2 |
74.8 |
1.468 |
19 |
0.083 |
0.904 |
-2.984 |
0 |
63 |
tRNA-Arg-TCG-4-1 |
active |
0.98 |
Arg-TCG |
scaffold_38 |
20586801 |
20586874 |
+ |
4 |
-23.7 |
64.3 |
1.084 |
2 |
0.023 |
0.641 |
-5.262 |
4 |
16 |
tRNA-Arg-TCG-3-1 |
active |
0.933 |
Arg-TCG |
scaffold_38 |
20613730 |
20613803 |
+ |
4 |
-23.7 |
65.5 |
0.322 |
49 |
0.030 |
0.678 |
-0.810 |
5 |
12 |
tRNA-Arg-TCG-2-1 |
active |
0.882 |
Arg-TCG |
scaffold_76 |
191231 |
191304 |
- |
4 |
-25.9 |
68.8 |
-0.121 |
9 |
0.087 |
0.970 |
-0.948 |
2 |
72 |
tRNA-Arg-TCT-1-1 |
active |
0.979 |
Arg-TCT |
scaffold_86 |
374584 |
374670 |
- |
5 |
-27.1 |
70.3 |
0.354 |
1 |
0.073 |
0.900 |
-0.784 |
6 |
39 |
tRNA-Arg-TCT-2-1 |
active |
0.973 |
Arg-TCT |
scaffold_108 |
1742098 |
1742187 |
- |
5 |
-28.1 |
71.9 |
0.310 |
7 |
0.048 |
0.735 |
-0.898 |
5 |
7 |
tRNA-Arg-TCT-3-1 |
active |
0.972 |
Arg-TCT |
scaffold_2 |
19581520 |
19581605 |
+ |
5 |
-30.7 |
71.1 |
1.634 |
5 |
0.096 |
0.862 |
0.732 |
0 |
17 |
tRNA-Arg-TCT-4-1 |
active |
0.969 |
Arg-TCT |
scaffold_61 |
8554331 |
8554418 |
- |
5 |
-25.6 |
70.8 |
1.498 |
1 |
0.046 |
0.797 |
-0.270 |
3 |
94 |
tRNA-Arg-TCT-5-1 |
active |
0.731 |
Arg-TCT |
scaffold_56 |
8692130 |
8692204 |
- |
5 |
-27.7 |
78.5 |
1.565 |
19 |
0.021 |
0.243 |
1.498 |
0 |
17 |
tRNA-Asn-GTT-1-4 |
active |
0.988 |
Asn-GTT |
scaffold_56 |
11222707 |
11222781 |
+ |
15 |
-26.4 |
80.9 |
1.214 |
10 |
0.047 |
0.805 |
-4.413 |
2 |
20 |
tRNA-Asn-GTT-1-2 |
active |
0.987 |
Asn-GTT |
scaffold_53 |
9799277 |
9799351 |
- |
15 |
-26.4 |
80.9 |
1.583 |
5 |
0.053 |
0.766 |
-1.929 |
0 |
83 |
tRNA-Asn-GTT-2-1 |
active |
0.985 |
Asn-GTT |
scaffold_6 |
32122965 |
32123039 |
- |
15 |
-26.4 |
79.9 |
1.246 |
4 |
0.099 |
0.868 |
-1.963 |
0 |
17 |
tRNA-Asn-GTT-1-3 |
active |
0.984 |
Asn-GTT |
scaffold_56 |
11165423 |
11165497 |
- |
15 |
-26.4 |
80.9 |
0.171 |
6 |
0.027 |
0.508 |
-2.189 |
6 |
23 |
tRNA-Asn-GTT-1-6 |
active |
0.984 |
Asn-GTT |
scaffold_320 |
213168 |
213242 |
+ |
15 |
-26.4 |
80.9 |
0.652 |
7 |
0.076 |
0.846 |
-1.556 |
1 |
86 |
tRNA-Asn-GTT-1-5 |
active |
0.969 |
Asn-GTT |
scaffold_91 |
3285599 |
3285673 |
+ |
15 |
-26.4 |
80.9 |
1.401 |
6 |
0.102 |
0.943 |
-3.422 |
0 |
2 |
tRNA-Asn-GTT-3-2 |
active |
0.965 |
Asn-GTT |
scaffold_2 |
46567308 |
46567382 |
+ |
15 |
-26.4 |
77.6 |
0.231 |
11 |
0.047 |
0.617 |
-0.863 |
1 |
1 |
tRNA-Asn-GTT-3-3 |
active |
0.958 |
Asn-GTT |
scaffold_2 |
46637886 |
46637960 |
- |
15 |
-26.4 |
77.6 |
0.199 |
11 |
0.041 |
0.555 |
-0.753 |
0 |
7 |
tRNA-Asn-GTT-3-5 |
active |
0.951 |
Asn-GTT |
scaffold_2 |
47126865 |
47126939 |
- |
15 |
-26.4 |
77.6 |
0.165 |
11 |
0.041 |
0.588 |
-0.723 |
2 |
5 |
tRNA-Asn-GTT-4-1 |
active |
0.95 |
Asn-GTT |
scaffold_2 |
10754461 |
10754535 |
+ |
15 |
-26.4 |
76.6 |
0.156 |
28 |
0.036 |
0.481 |
-0.761 |
1 |
2 |
tRNA-Asn-GTT-3-4 |
active |
0.836 |
Asn-GTT |
scaffold_2 |
46881368 |
46881442 |
+ |
15 |
-26.4 |
77.6 |
0.009 |
11 |
0.044 |
0.555 |
-0.698 |
1 |
4 |
tRNA-Asn-GTT-3-1 |
active |
0.832 |
Asn-GTT |
scaffold_2 |
10797165 |
10797239 |
- |
15 |
-26.4 |
77.6 |
0.198 |
28 |
0.035 |
0.412 |
-0.621 |
0 |
3 |
tRNA-Asn-GTT-1-1 |
active |
0.823 |
Asn-GTT |
scaffold_2 |
46477909 |
46477983 |
+ |
15 |
-26.4 |
80.9 |
0.040 |
10 |
0.081 |
1.001 |
-0.284 |
2 |
16 |
tRNA-Asn-GTT-5-1 |
active |
0.617 |
Asn-GTT |
scaffold_2 |
47463448 |
47463521 |
- |
15 |
-19.3 |
60.4 |
0.014 |
11 |
0.038 |
0.553 |
-0.703 |
0 |
20 |
tRNA-Asn-GTT-6-1 |
inactive |
-0.602 |
Asn-GTT |
scaffold_2 |
47134985 |
47135059 |
- |
15 |
-16.9 |
54.4 |
-0.293 |
42 |
0.032 |
0.573 |
-0.503 |
1 |
5 |
tRNA-Asp-GTC-2-5 |
active |
0.989 |
Asp-GTC |
scaffold_61 |
7252561 |
7252633 |
- |
9 |
-26.4 |
66.5 |
1.397 |
15 |
0.075 |
0.745 |
-4.825 |
6 |
104 |
tRNA-Asp-GTC-2-1 |
active |
0.988 |
Asp-GTC |
scaffold_9 |
5778566 |
5778638 |
- |
9 |
-26.4 |
66.5 |
1.600 |
12 |
0.041 |
0.651 |
-2.819 |
0 |
45 |
tRNA-Asp-GTC-2-7 |
active |
0.982 |
Asp-GTC |
scaffold_178 |
1195839 |
1195911 |
+ |
9 |
-26.4 |
66.5 |
1.513 |
8 |
0.093 |
1.063 |
-4.283 |
4 |
54 |
tRNA-Asp-GTC-2-4 |
active |
0.978 |
Asp-GTC |
scaffold_56 |
11216324 |
11216396 |
+ |
9 |
-26.4 |
66.5 |
0.631 |
14 |
0.022 |
0.633 |
-3.595 |
3 |
20 |
tRNA-Asp-GTC-3-1 |
active |
0.972 |
Asp-GTC |
scaffold_178 |
1193383 |
1193455 |
+ |
9 |
-26.4 |
66.5 |
0.331 |
11 |
0.100 |
0.771 |
-0.715 |
4 |
57 |
tRNA-Asp-GTC-2-6 |
active |
0.971 |
Asp-GTC |
scaffold_108 |
1788320 |
1788392 |
- |
9 |
-26.4 |
66.5 |
0.355 |
11 |
0.089 |
0.915 |
-0.965 |
1 |
14 |
tRNA-Asp-GTC-1-1 |
active |
0.912 |
Asp-GTC |
scaffold_9 |
3670096 |
3670168 |
- |
9 |
-26.4 |
65.4 |
1.035 |
9 |
0.043 |
0.303 |
-3.907 |
1 |
15 |
tRNA-Asp-GTC-2-2 |
active |
0.872 |
Asp-GTC |
scaffold_56 |
11171470 |
11171542 |
- |
9 |
-26.4 |
66.5 |
0.137 |
11 |
0.135 |
0.961 |
-0.513 |
7 |
23 |
tRNA-Asp-GTC-2-3 |
active |
0.872 |
Asp-GTC |
scaffold_56 |
11181726 |
11181798 |
- |
9 |
-26.4 |
66.5 |
0.137 |
11 |
0.135 |
0.971 |
-0.446 |
7 |
21 |
tRNA-Cys-GCA-1-1 |
active |
0.969 |
Cys-GCA |
scaffold_53 |
9978910 |
9978982 |
- |
34 |
-26.1 |
81.9 |
1.547 |
10 |
0.047 |
0.901 |
-2.221 |
1 |
57 |
tRNA-Cys-GCA-7-1 |
active |
0.955 |
Cys-GCA |
scaffold_53 |
9858003 |
9858075 |
- |
34 |
-23.9 |
77.3 |
1.526 |
7 |
0.054 |
1.276 |
-1.781 |
1 |
75 |
tRNA-Cys-GCA-1-2 |
active |
0.943 |
Cys-GCA |
scaffold_53 |
9979674 |
9979746 |
- |
34 |
-26.1 |
81.9 |
1.538 |
10 |
0.031 |
0.526 |
-4.093 |
1 |
56 |
tRNA-Cys-GCA-3-2 |
active |
0.525 |
Cys-GCA |
scaffold_10 |
148874 |
148946 |
+ |
34 |
-26.1 |
77.3 |
0.419 |
9 |
0.019 |
0.248 |
-2.161 |
1 |
22 |
tRNA-Cys-GCA-4-1 |
inactive |
-0.651 |
Cys-GCA |
scaffold_8 |
29452101 |
29452173 |
- |
34 |
-24.6 |
77.2 |
1.271 |
12 |
0.010 |
0.400 |
-1.100 |
1 |
0 |
tRNA-Cys-GCA-2-1 |
inactive |
-0.715 |
Cys-GCA |
scaffold_8 |
29449514 |
29449586 |
- |
34 |
-24.6 |
81.8 |
1.215 |
174 |
0.008 |
0.305 |
-1.492 |
1 |
0 |
tRNA-Cys-GCA-6-13 |
inactive |
-0.733 |
Cys-GCA |
scaffold_32 |
30903 |
30975 |
- |
34 |
-28.1 |
79.5 |
0.195 |
138 |
0.014 |
0.254 |
-0.001 |
6 |
17 |
tRNA-Cys-GCA-6-14 |
inactive |
-0.733 |
Cys-GCA |
scaffold_32 |
36362 |
36434 |
- |
34 |
-28.1 |
79.5 |
0.172 |
138 |
0.014 |
0.251 |
-0.001 |
6 |
18 |
tRNA-Cys-GCA-8-1 |
inactive |
-0.775 |
Cys-GCA |
scaffold_32 |
28173 |
28245 |
- |
34 |
-28.1 |
77 |
0.177 |
138 |
0.014 |
0.251 |
-0.001 |
6 |
13 |
tRNA-Cys-GCA-6-15 |
inactive |
-0.786 |
Cys-GCA |
scaffold_32 |
41808 |
41880 |
- |
34 |
-28.1 |
79.5 |
0.172 |
138 |
0.012 |
0.191 |
-0.001 |
5 |
18 |
tRNA-Cys-GCA-6-10 |
inactive |
-0.792 |
Cys-GCA |
scaffold_32 |
17235 |
17307 |
- |
34 |
-28.1 |
79.5 |
0.209 |
138 |
0.014 |
0.216 |
-0.001 |
6 |
1 |
tRNA-Cys-GCA-10-1 |
inactive |
-0.815 |
Cys-GCA |
scaffold_53 |
9856031 |
9856103 |
+ |
34 |
-23.9 |
66.4 |
1.334 |
13 |
0.003 |
0.000 |
-3.272 |
1 |
76 |
tRNA-Cys-GCA-5-1 |
inactive |
-0.866 |
Cys-GCA |
scaffold_53 |
9839836 |
9839908 |
- |
34 |
-23.9 |
77.1 |
0.966 |
10 |
0.004 |
0.112 |
-2.885 |
0 |
90 |
tRNA-Cys-GCA-3-1 |
inactive |
-0.89 |
Cys-GCA |
scaffold_10 |
142176 |
142248 |
+ |
34 |
-26.1 |
77.3 |
0.128 |
57 |
0.006 |
0.000 |
-1.734 |
1 |
24 |
tRNA-Cys-GCA-9-1 |
inactive |
-0.921 |
Cys-GCA |
scaffold_10 |
19059 |
19131 |
+ |
34 |
-23 |
71.7 |
0.119 |
132 |
0.016 |
0.195 |
-0.185 |
3 |
9 |
tRNA-Cys-GCA-15-1 |
inactive |
-0.923 |
Cys-GCA |
scaffold_32 |
44422 |
44494 |
- |
34 |
-16.1 |
65.2 |
0.224 |
151 |
0.005 |
0.093 |
0.052 |
4 |
18 |
tRNA-Cys-GCA-13-1 |
inactive |
-0.927 |
Cys-GCA |
scaffold_32 |
25439 |
25511 |
- |
34 |
-22.3 |
66.9 |
0.209 |
138 |
0.012 |
0.193 |
-0.001 |
6 |
11 |
tRNA-Cys-GCA-16-1 |
inactive |
-0.937 |
Cys-GCA |
scaffold_32 |
50342 |
50415 |
- |
34 |
-20.4 |
58 |
0.145 |
146 |
0.013 |
0.228 |
-0.230 |
2 |
18 |
tRNA-Cys-GCA-14-1 |
inactive |
-0.946 |
Cys-GCA |
scaffold_10 |
39847 |
39919 |
- |
34 |
-23.5 |
63.9 |
0.249 |
12 |
0.005 |
0.089 |
-0.489 |
0 |
12 |
tRNA-Cys-GCA-12-1 |
inactive |
-0.952 |
Cys-GCA |
scaffold_32 |
64788 |
64860 |
- |
34 |
-21.9 |
70.9 |
0.174 |
11 |
0.016 |
0.217 |
-0.565 |
0 |
28 |
tRNA-Gln-CTG-1-2 |
active |
0.987 |
Gln-CTG |
scaffold_101 |
1304343 |
1304415 |
+ |
10 |
-24.7 |
71.5 |
1.521 |
11 |
0.054 |
0.724 |
-2.526 |
0 |
23 |
tRNA-Gln-CTG-1-3 |
active |
0.974 |
Gln-CTG |
scaffold_108 |
1139093 |
1139165 |
+ |
10 |
-24.7 |
71.5 |
0.352 |
13 |
0.078 |
0.836 |
-1.061 |
5 |
15 |
tRNA-Gln-CTG-4-1 |
active |
0.963 |
Gln-CTG |
scaffold_108 |
1674816 |
1674888 |
+ |
10 |
-22 |
66.9 |
0.280 |
10 |
0.030 |
0.571 |
-0.969 |
1 |
19 |
tRNA-Gln-CTG-1-1 |
active |
0.872 |
Gln-CTG |
scaffold_61 |
8555434 |
8555506 |
- |
10 |
-24.7 |
71.5 |
1.478 |
3 |
0.017 |
0.687 |
-4.803 |
3 |
94 |
tRNA-Gln-CTG-1-4 |
active |
0.773 |
Gln-CTG |
scaffold_108 |
1748817 |
1748889 |
+ |
10 |
-24.7 |
71.5 |
-0.218 |
4 |
0.063 |
0.802 |
-0.232 |
5 |
7 |
tRNA-Gln-CTG-2-1 |
active |
0.589 |
Gln-CTG |
scaffold_2 |
46460399 |
46460471 |
- |
10 |
-24.2 |
71.1 |
-0.125 |
25 |
0.031 |
0.313 |
-1.119 |
0 |
18 |
tRNA-Gln-CTG-3-1 |
active |
0.587 |
Gln-CTG |
scaffold_2 |
46516011 |
46516083 |
+ |
10 |
-22 |
67.7 |
-0.157 |
25 |
0.026 |
0.270 |
-1.254 |
0 |
10 |
tRNA-Gln-CTG-6-1 |
inactive |
-0.795 |
Gln-CTG |
scaffold_2 |
46570448 |
46570524 |
- |
10 |
-15.6 |
60 |
-0.238 |
32 |
0.012 |
0.267 |
-1.125 |
1 |
1 |
tRNA-Gln-CTG-5-1 |
inactive |
-0.815 |
Gln-CTG |
scaffold_2 |
47123908 |
47123980 |
+ |
10 |
-14 |
57.3 |
-0.264 |
32 |
0.014 |
0.333 |
-1.075 |
1 |
3 |
tRNA-Gln-CTG-7-1 |
inactive |
-0.83 |
Gln-CTG |
scaffold_2 |
46884416 |
46884487 |
- |
10 |
-14.1 |
59.6 |
-0.241 |
32 |
0.005 |
0.118 |
-1.074 |
1 |
4 |
tRNA-Gln-TTG-1-1 |
active |
0.973 |
Gln-TTG |
scaffold_53 |
8311274 |
8311346 |
- |
4 |
-27.1 |
72.6 |
1.629 |
9 |
0.096 |
0.910 |
0.143 |
0 |
51 |
tRNA-Gln-TTG-2-2 |
active |
0.963 |
Gln-TTG |
scaffold_108 |
1672963 |
1673035 |
+ |
4 |
-22 |
66.9 |
0.354 |
10 |
0.066 |
0.763 |
-0.733 |
1 |
19 |
tRNA-Gln-TTG-2-1 |
inactive |
-0.552 |
Gln-TTG |
scaffold_38 |
20595455 |
20595527 |
- |
4 |
-22 |
66.9 |
0.547 |
8 |
0.014 |
0.253 |
-2.502 |
5 |
14 |
tRNA-Gln-TTG-1-2 |
inactive |
-0.729 |
Gln-TTG |
scaffold_108 |
1256230 |
1256302 |
- |
4 |
-27.1 |
72.6 |
0.441 |
14 |
0.013 |
0.194 |
-1.259 |
1 |
21 |
tRNA-Glu-CTC-1-1 |
active |
0.976 |
Glu-CTC |
scaffold_1 |
23511483 |
23511555 |
+ |
5 |
-26.4 |
73.2 |
0.348 |
4 |
0.065 |
0.718 |
-0.827 |
1 |
41 |
tRNA-Glu-CTC-1-5 |
active |
0.974 |
Glu-CTC |
scaffold_108 |
1119562 |
1119634 |
- |
5 |
-26.4 |
73.2 |
0.332 |
6 |
0.049 |
0.777 |
-0.879 |
1 |
15 |
tRNA-Glu-CTC-1-2 |
active |
0.934 |
Glu-CTC |
scaffold_2 |
46426623 |
46426695 |
+ |
5 |
-26.4 |
73.2 |
1.310 |
6 |
0.026 |
0.341 |
-3.414 |
3 |
33 |
tRNA-Glu-TTC-4-1 |
active |
0.983 |
Glu-TTC |
scaffold_6 |
55159148 |
55159220 |
- |
6 |
-26.7 |
71.2 |
1.618 |
8 |
0.073 |
1.106 |
-3.943 |
0 |
19 |
tRNA-Glu-TTC-4-3 |
active |
0.957 |
Glu-TTC |
scaffold_151 |
942793 |
942865 |
- |
6 |
-26.7 |
71.2 |
1.351 |
10 |
0.079 |
1.063 |
-3.518 |
0 |
0 |
tRNA-Glu-TTC-4-2 |
active |
0.95 |
Glu-TTC |
scaffold_61 |
7442747 |
7442819 |
- |
6 |
-26.7 |
71.2 |
0.354 |
8 |
0.038 |
0.678 |
-0.573 |
0 |
45 |
tRNA-Glu-TTC-3-1 |
active |
0.935 |
Glu-TTC |
scaffold_6 |
51660742 |
51660814 |
- |
6 |
-24.8 |
70.4 |
1.461 |
11 |
0.119 |
1.158 |
-1.676 |
0 |
17 |
tRNA-Glu-TTC-1-1 |
active |
0.932 |
Glu-TTC |
scaffold_2 |
46480661 |
46480733 |
+ |
6 |
-26.4 |
68.7 |
0.121 |
4 |
0.061 |
0.708 |
-0.612 |
3 |
16 |
tRNA-Glu-TTC-2-1 |
active |
0.914 |
Glu-TTC |
scaffold_56 |
11159231 |
11159303 |
+ |
6 |
-25.1 |
66.8 |
-0.108 |
8 |
0.034 |
0.712 |
-2.636 |
2 |
25 |
tRNA-Gly-CCC-2-1 |
active |
0.985 |
Gly-CCC |
scaffold_4 |
20610546 |
20610617 |
- |
5 |
-31.4 |
75.1 |
1.274 |
7 |
0.060 |
0.641 |
-4.740 |
0 |
135 |
tRNA-Gly-CCC-2-2 |
active |
0.882 |
Gly-CCC |
scaffold_37 |
18471324 |
18471395 |
+ |
5 |
-31.4 |
75.1 |
1.391 |
7 |
0.036 |
0.162 |
-3.845 |
0 |
41 |
tRNA-Gly-CCC-1-1 |
inactive |
-0.537 |
Gly-CCC |
scaffold_2 |
10786078 |
10786149 |
- |
5 |
-25.1 |
78.7 |
-0.162 |
42 |
0.019 |
0.188 |
-1.243 |
0 |
3 |
tRNA-Gly-CCC-3-1 |
inactive |
-0.722 |
Gly-CCC |
scaffold_4 |
5924039 |
5924110 |
+ |
5 |
-22.4 |
68 |
? |
41 |
0.006 |
0.000 |
? |
0 |
6 |
tRNA-Gly-CCC-4-1 |
inactive |
-0.882 |
Gly-CCC |
scaffold_2 |
20293523 |
20293594 |
- |
5 |
-16.9 |
61.9 |
0.000 |
219 |
0.008 |
0.120 |
-0.014 |
0 |
0 |
tRNA-Gly-GCC-1-6 |
active |
0.988 |
Gly-GCC |
scaffold_56 |
11209655 |
11209726 |
- |
11 |
-26.4 |
81 |
1.132 |
9 |
0.036 |
0.780 |
-3.400 |
2 |
18 |
tRNA-Gly-GCC-1-2 |
active |
0.987 |
Gly-GCC |
scaffold_22 |
2975476 |
2975547 |
- |
11 |
-26.4 |
81 |
0.976 |
10 |
0.049 |
0.631 |
-4.339 |
1 |
68 |
tRNA-Gly-GCC-1-5 |
active |
0.939 |
Gly-GCC |
scaffold_38 |
20597718 |
20597789 |
- |
11 |
-26.4 |
81 |
0.667 |
8 |
0.023 |
0.264 |
-3.484 |
4 |
14 |
tRNA-Gly-GCC-1-1 |
active |
0.922 |
Gly-GCC |
scaffold_3 |
31957287 |
31957358 |
+ |
11 |
-26.4 |
81 |
1.082 |
5 |
0.022 |
0.269 |
-4.141 |
1 |
11 |
tRNA-Gly-GCC-1-4 |
inactive |
-0.63 |
Gly-GCC |
scaffold_22 |
3406777 |
3406848 |
+ |
11 |
-26.4 |
81 |
1.331 |
7 |
0.017 |
0.131 |
-0.912 |
3 |
38 |
tRNA-Gly-GCC-3-1 |
inactive |
-0.675 |
Gly-GCC |
scaffold_22 |
3397628 |
3397699 |
- |
11 |
-21.5 |
72.8 |
0.263 |
5 |
0.017 |
0.276 |
0.053 |
3 |
37 |
tRNA-Gly-GCC-1-3 |
inactive |
-0.734 |
Gly-GCC |
scaffold_22 |
3398513 |
3398584 |
- |
11 |
-26.4 |
81 |
0.793 |
6 |
0.013 |
0.082 |
-0.501 |
3 |
38 |
tRNA-Gly-GCC-4-1 |
inactive |
-0.781 |
Gly-GCC |
scaffold_22 |
3407393 |
3407463 |
+ |
11 |
-24.6 |
65.2 |
1.266 |
9 |
0.013 |
0.088 |
0.128 |
3 |
38 |
tRNA-Gly-GCC-5-1 |
inactive |
-0.844 |
Gly-GCC |
scaffold_3 |
35991488 |
35991558 |
- |
11 |
-22 |
60.7 |
? |
351 |
0.017 |
0.162 |
0.051 |
0 |
22 |
tRNA-Gly-TCC-1-3 |
active |
0.987 |
Gly-TCC |
scaffold_61 |
7251873 |
7251945 |
+ |
6 |
-25.1 |
73.8 |
1.065 |
7 |
0.079 |
0.721 |
-2.662 |
6 |
104 |
tRNA-Gly-TCC-2-1 |
active |
0.987 |
Gly-TCC |
scaffold_334 |
419100 |
419172 |
- |
6 |
-25.1 |
73.8 |
0.965 |
6 |
0.065 |
0.794 |
-4.290 |
1 |
41 |
tRNA-Gly-TCC-3-1 |
active |
0.952 |
Gly-TCC |
scaffold_56 |
11181221 |
11181293 |
- |
6 |
-25.1 |
66.5 |
0.311 |
14 |
0.104 |
0.842 |
-0.359 |
7 |
21 |
tRNA-Gly-TCC-1-2 |
active |
0.949 |
Gly-TCC |
scaffold_56 |
11170965 |
11171037 |
- |
6 |
-25.1 |
73.8 |
0.296 |
14 |
0.110 |
0.842 |
-0.359 |
6 |
23 |
tRNA-Gly-TCC-1-1 |
active |
0.912 |
Gly-TCC |
scaffold_2 |
46430007 |
46430079 |
+ |
6 |
-25.1 |
73.8 |
1.304 |
8 |
0.031 |
0.289 |
-3.301 |
3 |
31 |
tRNA-Gly-TCC-4-1 |
inactive |
-0.774 |
Gly-TCC |
scaffold_54 |
8575016 |
8575088 |
- |
6 |
-19.2 |
66.3 |
? |
326 |
0.005 |
0.087 |
? |
0 |
10 |
tRNA-His-GTG-1-1 |
active |
0.984 |
His-GTG |
scaffold_2 |
46430826 |
46430898 |
+ |
7 |
-25.5 |
60.1 |
1.289 |
10 |
0.063 |
0.816 |
-1.195 |
3 |
31 |
tRNA-His-GTG-1-6 |
active |
0.971 |
His-GTG |
scaffold_23 |
20500800 |
20500872 |
- |
7 |
-25.5 |
60.1 |
1.603 |
33 |
0.073 |
0.702 |
-0.147 |
2 |
92 |
tRNA-His-GTG-1-5 |
active |
0.969 |
His-GTG |
scaffold_23 |
20500020 |
20500092 |
- |
7 |
-25.5 |
60.1 |
1.499 |
34 |
0.057 |
0.767 |
0.433 |
2 |
93 |
tRNA-His-GTG-1-7 |
active |
0.968 |
His-GTG |
scaffold_23 |
20501392 |
20501464 |
+ |
7 |
-25.5 |
60.1 |
1.484 |
31 |
0.053 |
0.918 |
0.031 |
2 |
92 |
tRNA-His-GTG-1-4 |
inactive |
-0.799 |
His-GTG |
scaffold_21 |
6237296 |
6237368 |
+ |
7 |
-25.5 |
60.1 |
0.931 |
13 |
0.016 |
0.095 |
-0.164 |
0 |
0 |
tRNA-Ile-AAT-1-4 |
active |
0.989 |
Ile-AAT |
scaffold_61 |
8494951 |
8495025 |
- |
9 |
-25.5 |
81.2 |
1.573 |
10 |
0.032 |
0.729 |
-5.276 |
2 |
74 |
tRNA-Ile-AAT-1-3 |
active |
0.987 |
Ile-AAT |
scaffold_61 |
7257647 |
7257721 |
- |
9 |
-25.5 |
81.2 |
1.246 |
10 |
0.079 |
0.673 |
-3.480 |
6 |
103 |
tRNA-Ile-AAT-1-1 |
active |
0.979 |
Ile-AAT |
scaffold_38 |
21199083 |
21199157 |
+ |
9 |
-25.5 |
81.2 |
1.390 |
6 |
0.044 |
0.425 |
-2.635 |
5 |
22 |
tRNA-Ile-AAT-1-7 |
active |
0.979 |
Ile-AAT |
scaffold_108 |
1874030 |
1874104 |
+ |
9 |
-25.5 |
81.2 |
0.232 |
25 |
0.056 |
0.920 |
-1.108 |
1 |
28 |
tRNA-Ile-AAT-2-1 |
active |
0.977 |
Ile-AAT |
scaffold_108 |
1854140 |
1854213 |
- |
9 |
-23.4 |
75.5 |
0.225 |
4 |
0.087 |
0.791 |
-0.827 |
2 |
33 |
tRNA-Ile-AAT-1-6 |
active |
0.971 |
Ile-AAT |
scaffold_108 |
1708332 |
1708406 |
- |
9 |
-25.5 |
81.2 |
0.319 |
11 |
0.079 |
0.943 |
-0.854 |
6 |
13 |
tRNA-Ile-AAT-1-8 |
active |
0.938 |
Ile-AAT |
scaffold_111 |
2385499 |
2385573 |
+ |
9 |
-25.5 |
81.2 |
0.164 |
3 |
0.079 |
0.851 |
-0.424 |
0 |
48 |
tRNA-Ile-AAT-1-2 |
active |
0.913 |
Ile-AAT |
scaffold_38 |
21331812 |
21331886 |
+ |
9 |
-25.5 |
81.2 |
-0.258 |
12 |
0.035 |
0.794 |
-0.927 |
3 |
12 |
tRNA-Ile-AAT-1-5 |
active |
0.859 |
Ile-AAT |
scaffold_108 |
1698852 |
1698926 |
- |
9 |
-25.5 |
81.2 |
0.231 |
12 |
0.072 |
0.837 |
-0.803 |
8 |
15 |
tRNA-Ile-TAT-2-2 |
active |
0.982 |
Ile-TAT |
scaffold_38 |
21361896 |
21361988 |
+ |
5 |
-30.5 |
73.2 |
0.925 |
2 |
0.072 |
0.916 |
-1.893 |
0 |
12 |
tRNA-Ile-TAT-2-1 |
active |
0.959 |
Ile-TAT |
scaffold_18 |
27159863 |
27159955 |
+ |
5 |
-32.2 |
73.2 |
1.416 |
6 |
0.109 |
1.042 |
0.214 |
0 |
26 |
tRNA-Ile-TAT-2-3 |
active |
0.944 |
Ile-TAT |
scaffold_108 |
1718633 |
1718727 |
- |
5 |
-33.3 |
73.1 |
0.367 |
2 |
0.089 |
0.886 |
-0.048 |
2 |
14 |
tRNA-Ile-TAT-1-1 |
active |
0.943 |
Ile-TAT |
scaffold_52 |
12849603 |
12849696 |
- |
5 |
-26.5 |
73.8 |
1.429 |
4 |
0.038 |
0.571 |
0.131 |
0 |
117 |
tRNA-Ile-TAT-3-1 |
inactive |
-0.561 |
Ile-TAT |
scaffold_13 |
21450083 |
21450156 |
+ |
5 |
-24.7 |
67.4 |
0.317 |
9 |
0.016 |
0.000 |
-2.623 |
3 |
7 |
tRNA-Leu-AAG-2-3 |
active |
0.981 |
Leu-AAG |
scaffold_13 |
21460863 |
21460945 |
- |
5 |
-30.7 |
74.8 |
1.225 |
6 |
0.061 |
0.944 |
-1.833 |
4 |
7 |
tRNA-Leu-AAG-2-2 |
active |
0.978 |
Leu-AAG |
scaffold_13 |
21257545 |
21257627 |
+ |
5 |
-30.7 |
74.8 |
0.235 |
8 |
0.041 |
0.511 |
-1.420 |
3 |
6 |
tRNA-Leu-AAG-1-1 |
active |
0.953 |
Leu-AAG |
scaffold_108 |
1137534 |
1137616 |
+ |
5 |
-31.4 |
72.9 |
0.274 |
5 |
0.070 |
0.769 |
-0.616 |
5 |
15 |
tRNA-Leu-AAG-2-1 |
active |
0.951 |
Leu-AAG |
scaffold_4 |
38736290 |
38736372 |
+ |
5 |
-30.7 |
74.8 |
1.543 |
8 |
0.019 |
0.487 |
-4.620 |
0 |
45 |
tRNA-Leu-AAG-2-4 |
active |
0.917 |
Leu-AAG |
scaffold_108 |
1310314 |
1310396 |
+ |
5 |
-30.7 |
74.8 |
0.356 |
4 |
0.123 |
1.027 |
-1.003 |
1 |
32 |
tRNA-Leu-CAA-1-1 |
active |
0.974 |
Leu-CAA |
scaffold_1 |
23511235 |
23511340 |
+ |
5 |
-41.3 |
77.3 |
0.310 |
8 |
0.073 |
0.770 |
-1.180 |
1 |
41 |
tRNA-Leu-CAA-1-3 |
active |
0.96 |
Leu-CAA |
scaffold_108 |
1156640 |
1156746 |
+ |
5 |
-39.9 |
77.3 |
0.327 |
6 |
0.097 |
1.095 |
-0.917 |
0 |
15 |
tRNA-Leu-CAA-2-1 |
active |
0.954 |
Leu-CAA |
scaffold_108 |
1739542 |
1739647 |
+ |
5 |
-36.2 |
78.7 |
0.116 |
8 |
0.058 |
0.780 |
-0.749 |
6 |
10 |
tRNA-Leu-CAA-1-2 |
active |
0.951 |
Leu-CAA |
scaffold_108 |
1139459 |
1139565 |
- |
5 |
-39 |
77.3 |
0.345 |
6 |
0.076 |
0.944 |
-0.710 |
5 |
15 |
tRNA-Leu-CAA-1-4 |
active |
0.774 |
Leu-CAA |
scaffold_108 |
1728061 |
1728166 |
+ |
5 |
-38.7 |
77.3 |
0.184 |
12 |
0.043 |
0.202 |
-0.897 |
3 |
15 |
tRNA-Leu-CAG-2-2 |
active |
0.987 |
Leu-CAG |
scaffold_56 |
11214423 |
11214506 |
- |
6 |
-32.8 |
77.3 |
1.008 |
7 |
0.033 |
0.958 |
-4.008 |
3 |
20 |
tRNA-Leu-CAG-1-1 |
active |
0.985 |
Leu-CAG |
scaffold_38 |
21166053 |
21166136 |
+ |
6 |
-35.7 |
78.2 |
1.221 |
7 |
0.047 |
0.913 |
-4.980 |
1 |
29 |
tRNA-Leu-CAG-2-1 |
active |
0.981 |
Leu-CAG |
scaffold_22 |
24776991 |
24777074 |
+ |
6 |
-32.8 |
77.3 |
1.419 |
9 |
0.063 |
1.090 |
-5.087 |
0 |
30 |
tRNA-Leu-TAA-2-1 |
active |
0.928 |
Leu-TAA |
scaffold_108 |
1885072 |
1885155 |
+ |
3 |
-31.4 |
84.1 |
0.306 |
18 |
0.047 |
0.682 |
-1.167 |
3 |
28 |
tRNA-Leu-TAA-3-1 |
active |
0.892 |
Leu-TAA |
scaffold_108 |
1695447 |
1695530 |
+ |
3 |
-33.5 |
90.8 |
0.333 |
7 |
0.051 |
0.567 |
-0.616 |
5 |
15 |
tRNA-Leu-TAA-1-1 |
active |
0.888 |
Leu-TAA |
scaffold_68 |
3120037 |
3120120 |
- |
3 |
-32.3 |
88.7 |
1.309 |
6 |
0.091 |
0.949 |
-1.876 |
0 |
3 |
tRNA-Leu-TAG-1-1 |
active |
0.954 |
Leu-TAG |
scaffold_61 |
8554936 |
8555018 |
+ |
3 |
-33.3 |
75.2 |
1.601 |
9 |
0.036 |
0.616 |
-2.881 |
3 |
94 |
tRNA-Leu-TAG-2-1 |
active |
0.941 |
Leu-TAG |
scaffold_4 |
38648586 |
38648668 |
- |
3 |
-30.8 |
73.9 |
1.479 |
17 |
0.037 |
0.907 |
-3.675 |
0 |
59 |
tRNA-Leu-TAG-3-1 |
active |
0.557 |
Leu-TAG |
scaffold_13 |
21454183 |
21454265 |
- |
3 |
-29.2 |
73.7 |
0.895 |
8 |
0.014 |
0.290 |
-3.626 |
5 |
7 |
tRNA-Lys-CTT-1-1 |
active |
0.989 |
Lys-CTT |
scaffold_2 |
46431637 |
46431710 |
+ |
14 |
-28 |
87.8 |
1.136 |
4 |
0.045 |
0.677 |
-3.760 |
3 |
31 |
tRNA-Lys-CTT-1-2 |
active |
0.988 |
Lys-CTT |
scaffold_4 |
23152087 |
23152160 |
- |
14 |
-28 |
87.8 |
0.463 |
5 |
0.044 |
0.601 |
-3.970 |
6 |
27 |
tRNA-Lys-CTT-1-5 |
active |
0.988 |
Lys-CTT |
scaffold_21 |
33807934 |
33808007 |
+ |
14 |
-28 |
87.8 |
1.113 |
9 |
0.038 |
0.522 |
-3.731 |
1 |
24 |
tRNA-Lys-CTT-1-7 |
active |
0.986 |
Lys-CTT |
scaffold_38 |
21201079 |
21201152 |
- |
14 |
-28 |
87.8 |
0.953 |
8 |
0.030 |
0.528 |
-4.106 |
6 |
22 |
tRNA-Lys-CTT-1-3 |
active |
0.984 |
Lys-CTT |
scaffold_4 |
23163303 |
23163376 |
+ |
14 |
-28 |
87.8 |
0.243 |
3 |
0.047 |
0.566 |
-1.743 |
6 |
23 |
tRNA-Lys-CTT-1-4 |
active |
0.956 |
Lys-CTT |
scaffold_4 |
23172158 |
23172231 |
+ |
14 |
-28 |
87.8 |
0.189 |
8 |
0.041 |
0.558 |
-0.676 |
4 |
23 |
tRNA-Lys-CTT-2-1 |
active |
0.947 |
Lys-CTT |
scaffold_20 |
2269275 |
2269348 |
+ |
14 |
-30.1 |
88 |
0.353 |
11 |
0.066 |
0.818 |
-0.573 |
0 |
45 |
tRNA-Lys-CTT-3-1 |
active |
0.88 |
Lys-CTT |
scaffold_4 |
23159497 |
23159570 |
- |
14 |
-25.6 |
87.2 |
0.220 |
11 |
0.025 |
0.619 |
-0.649 |
7 |
24 |
tRNA-Lys-CTT-1-6 |
active |
0.851 |
Lys-CTT |
scaffold_35 |
11129114 |
11129187 |
- |
14 |
-28 |
87.8 |
-0.124 |
8 |
0.047 |
0.719 |
-0.685 |
0 |
17 |
tRNA-Lys-CTT-6-1 |
active |
0.703 |
Lys-CTT |
scaffold_0 |
57908666 |
57908739 |
+ |
14 |
-24.2 |
75.2 |
? |
122 |
0.025 |
0.328 |
? |
0 |
0 |
tRNA-Lys-CTT-4-1 |
active |
0.657 |
Lys-CTT |
scaffold_109 |
213244 |
213317 |
- |
14 |
-24.7 |
84.3 |
? |
351 |
0.023 |
0.309 |
? |
0 |
13 |
tRNA-Lys-CTT-5-1 |
active |
0.506 |
Lys-CTT |
scaffold_4 |
23161355 |
23161428 |
+ |
14 |
-27.1 |
83.8 |
0.243 |
5 |
0.016 |
0.061 |
-2.038 |
6 |
23 |
tRNA-Lys-CTT-8-1 |
inactive |
-0.748 |
Lys-CTT |
scaffold_29 |
24987480 |
24987553 |
- |
14 |
-25.9 |
67.1 |
? |
61 |
0.004 |
0.092 |
? |
0 |
3 |
tRNA-Lys-CTT-7-1 |
inactive |
-0.955 |
Lys-CTT |
scaffold_65 |
4580101 |
4580174 |
+ |
14 |
-19.1 |
66.9 |
0.000 |
248 |
0.006 |
0.000 |
0.000 |
0 |
67 |
tRNA-Lys-TTT-1-3 |
active |
0.989 |
Lys-TTT |
scaffold_61 |
8556454 |
8556527 |
- |
11 |
-27.5 |
87.8 |
1.596 |
6 |
0.061 |
1.035 |
-4.116 |
3 |
94 |
tRNA-Lys-TTT-1-4 |
active |
0.981 |
Lys-TTT |
scaffold_86 |
371446 |
371519 |
+ |
11 |
-27.5 |
87.8 |
0.329 |
8 |
0.063 |
0.906 |
-1.027 |
6 |
40 |
tRNA-Lys-TTT-1-5 |
active |
0.943 |
Lys-TTT |
scaffold_108 |
1135405 |
1135478 |
- |
11 |
-27.5 |
87.8 |
0.333 |
5 |
0.049 |
0.604 |
-0.657 |
5 |
15 |
tRNA-Lys-TTT-1-1 |
active |
0.938 |
Lys-TTT |
scaffold_12 |
18140051 |
18140124 |
+ |
11 |
-27.5 |
87.8 |
1.387 |
8 |
0.022 |
0.384 |
-2.753 |
1 |
42 |
tRNA-Lys-TTT-2-1 |
active |
0.916 |
Lys-TTT |
scaffold_108 |
1729929 |
1730002 |
+ |
11 |
-23.6 |
82.5 |
0.303 |
11 |
0.023 |
0.526 |
-0.724 |
4 |
14 |
tRNA-Lys-TTT-5-1 |
active |
0.913 |
Lys-TTT |
scaffold_86 |
372559 |
372632 |
- |
11 |
-21.3 |
79.1 |
0.221 |
7 |
0.050 |
0.744 |
-0.664 |
6 |
40 |
tRNA-Lys-TTT-6-1 |
active |
0.804 |
Lys-TTT |
scaffold_108 |
1738709 |
1738782 |
- |
11 |
-24.6 |
80.6 |
0.056 |
10 |
0.039 |
0.765 |
-0.484 |
5 |
10 |
tRNA-Lys-TTT-1-2 |
active |
0.558 |
Lys-TTT |
scaffold_12 |
18140455 |
18140528 |
- |
11 |
-27.5 |
87.8 |
0.379 |
8 |
0.016 |
0.101 |
-2.324 |
1 |
42 |
tRNA-Lys-TTT-4-1 |
inactive |
-0.634 |
Lys-TTT |
scaffold_101 |
4437676 |
4437749 |
- |
11 |
-23.7 |
83.1 |
-0.252 |
60 |
0.009 |
0.072 |
? |
0 |
0 |
tRNA-Lys-TTT-3-1 |
inactive |
-0.746 |
Lys-TTT |
scaffold_108 |
1828088 |
1828161 |
+ |
11 |
-25.7 |
81.8 |
0.236 |
10 |
0.010 |
0.114 |
-0.858 |
1 |
28 |
tRNA-Lys-TTT-7-1 |
inactive |
-0.788 |
Lys-TTT |
scaffold_9 |
7997259 |
7997339 |
+ |
11 |
-26.2 |
60.3 |
-0.027 |
351 |
0.018 |
0.268 |
-0.246 |
0 |
2 |
tRNA-Met-CAT-3-1 |
active |
0.974 |
Met-CAT |
scaffold_108 |
1134745 |
1134818 |
+ |
15 |
-25.8 |
77.4 |
0.367 |
6 |
0.076 |
0.545 |
-1.041 |
5 |
15 |
tRNA-Met-CAT-2-1 |
active |
0.943 |
Met-CAT |
scaffold_434 |
102129 |
102202 |
- |
15 |
-25 |
82.3 |
0.250 |
10 |
0.107 |
0.691 |
-0.616 |
0 |
36 |
tRNA-Met-CAT-1-1 |
active |
0.93 |
Met-CAT |
scaffold_108 |
1137239 |
1137312 |
- |
15 |
-25.8 |
76.7 |
0.296 |
11 |
0.069 |
0.818 |
-0.242 |
5 |
15 |
tRNA-Met-CAT-5-1 |
active |
0.929 |
Met-CAT |
scaffold_38 |
21335209 |
21335282 |
- |
15 |
-26.7 |
79.9 |
-0.142 |
4 |
0.030 |
0.810 |
-3.329 |
3 |
12 |
tRNA-Met-CAT-4-1 |
active |
0.857 |
Met-CAT |
scaffold_51 |
12475769 |
12475842 |
+ |
15 |
-28 |
80.9 |
0.224 |
6 |
0.123 |
1.164 |
-0.120 |
0 |
36 |
tRNA-Met-CAT-7-1 |
inactive |
-0.898 |
Met-CAT |
scaffold_13 |
20577709 |
20577782 |
- |
15 |
-17 |
61.4 |
0.026 |
6 |
0.004 |
0.174 |
-0.396 |
0 |
82 |
tRNA-Met-CAT-6-1 |
inactive |
-0.906 |
Met-CAT |
scaffold_106 |
2756194 |
2756267 |
- |
15 |
-17.5 |
56.8 |
0.000 |
11 |
0.004 |
0.000 |
-0.133 |
0 |
2 |
tRNA-Phe-GAA-1-1 |
active |
0.985 |
Phe-GAA |
scaffold_5 |
29155339 |
29155412 |
+ |
8 |
-21.9 |
88.9 |
1.047 |
5 |
0.079 |
0.960 |
-2.453 |
0 |
27 |
tRNA-Phe-GAA-1-5 |
active |
0.979 |
Phe-GAA |
scaffold_320 |
212946 |
213019 |
- |
8 |
-21.9 |
88.9 |
0.650 |
19 |
0.047 |
1.105 |
-1.392 |
1 |
86 |
tRNA-Phe-GAA-1-3 |
active |
0.978 |
Phe-GAA |
scaffold_108 |
1709583 |
1709656 |
- |
8 |
-21.9 |
88.9 |
0.328 |
14 |
0.050 |
0.758 |
-0.886 |
5 |
13 |
tRNA-Phe-GAA-2-2 |
active |
0.952 |
Phe-GAA |
scaffold_86 |
372135 |
372208 |
+ |
8 |
-21.9 |
87.9 |
0.218 |
2 |
0.041 |
0.728 |
-0.687 |
6 |
40 |
tRNA-Phe-GAA-1-4 |
active |
0.949 |
Phe-GAA |
scaffold_178 |
1195231 |
1195304 |
+ |
8 |
-21.9 |
88.9 |
0.353 |
5 |
0.083 |
0.992 |
-0.555 |
4 |
55 |
tRNA-Phe-GAA-1-2 |
active |
0.935 |
Phe-GAA |
scaffold_108 |
1119925 |
1119998 |
+ |
8 |
-21.9 |
88.9 |
0.366 |
11 |
0.069 |
0.874 |
-0.549 |
1 |
15 |
tRNA-Phe-GAA-2-1 |
active |
0.522 |
Phe-GAA |
scaffold_86 |
368528 |
368601 |
+ |
8 |
-21.9 |
87.9 |
0.179 |
351 |
0.014 |
0.161 |
-4.770 |
6 |
41 |
tRNA-Phe-GAA-3-1 |
inactive |
-0.908 |
Phe-GAA |
scaffold_14 |
31479429 |
31479502 |
+ |
8 |
-15.1 |
57 |
-0.074 |
102 |
0.009 |
0.120 |
0.036 |
0 |
19 |
tRNA-Pro-AGG-1-5 |
active |
0.988 |
Pro-AGG |
scaffold_38 |
21199796 |
21199868 |
+ |
8 |
-29.5 |
70.2 |
1.383 |
3 |
0.035 |
0.559 |
-4.216 |
6 |
22 |
tRNA-Pro-AGG-1-2 |
active |
0.987 |
Pro-AGG |
scaffold_4 |
23172706 |
23172778 |
+ |
8 |
-29.5 |
70.2 |
0.477 |
4 |
0.053 |
0.754 |
-4.141 |
4 |
23 |
tRNA-Pro-AGG-1-4 |
active |
0.983 |
Pro-AGG |
scaffold_13 |
21459185 |
21459257 |
+ |
8 |
-29.5 |
70.2 |
1.278 |
16 |
0.043 |
0.826 |
-4.575 |
5 |
7 |
tRNA-Pro-AGG-1-7 |
active |
0.983 |
Pro-AGG |
scaffold_40 |
18238775 |
18238847 |
- |
8 |
-29.5 |
70.2 |
1.447 |
3 |
0.056 |
0.702 |
-4.775 |
1 |
9 |
tRNA-Pro-AGG-1-6 |
active |
0.982 |
Pro-AGG |
scaffold_39 |
4837652 |
4837724 |
- |
8 |
-29.5 |
70.2 |
1.460 |
3 |
0.070 |
1.054 |
-4.082 |
1 |
13 |
tRNA-Pro-AGG-2-1 |
active |
0.982 |
Pro-AGG |
scaffold_13 |
21461514 |
21461586 |
+ |
8 |
-29.5 |
67.8 |
0.930 |
3 |
0.031 |
0.594 |
-3.060 |
4 |
7 |
tRNA-Pro-AGG-1-3 |
active |
0.742 |
Pro-AGG |
scaffold_11 |
49265630 |
49265702 |
+ |
8 |
-29.5 |
70.2 |
1.383 |
3 |
0.018 |
0.085 |
-1.460 |
0 |
93 |
tRNA-Pro-AGG-1-1 |
active |
0.649 |
Pro-AGG |
scaffold_4 |
23160919 |
23160991 |
- |
8 |
-29.5 |
70.2 |
0.053 |
5 |
0.041 |
0.117 |
-0.423 |
6 |
23 |
tRNA-Pro-CGG-1-3 |
active |
0.931 |
Pro-CGG |
scaffold_61 |
7253194 |
7253266 |
- |
3 |
-29.5 |
70.2 |
1.402 |
11 |
0.078 |
0.743 |
-2.982 |
6 |
104 |
tRNA-Pro-CGG-1-2 |
active |
0.906 |
Pro-CGG |
scaffold_39 |
4837132 |
4837204 |
+ |
3 |
-29.5 |
70.2 |
1.176 |
5 |
0.096 |
0.872 |
-1.026 |
1 |
13 |
tRNA-Pro-CGG-1-1 |
active |
0.844 |
Pro-CGG |
scaffold_4 |
23163464 |
23163536 |
- |
3 |
-29.5 |
70.2 |
0.713 |
15 |
0.036 |
0.277 |
-1.038 |
6 |
23 |
tRNA-Pro-TGG-1-3 |
active |
0.987 |
Pro-TGG |
scaffold_21 |
33788665 |
33788737 |
- |
4 |
-29.5 |
70.3 |
0.871 |
6 |
0.066 |
0.763 |
-3.027 |
2 |
33 |
tRNA-Pro-TGG-1-1 |
active |
0.984 |
Pro-TGG |
scaffold_4 |
23153084 |
23153156 |
+ |
4 |
-29.5 |
70.3 |
0.837 |
3 |
0.069 |
0.729 |
-5.226 |
6 |
27 |
tRNA-Pro-TGG-2-1 |
active |
0.982 |
Pro-TGG |
scaffold_40 |
18238479 |
18238551 |
+ |
4 |
-28.9 |
70.5 |
1.549 |
3 |
0.051 |
0.725 |
-4.346 |
1 |
9 |
tRNA-Pro-TGG-1-2 |
active |
0.977 |
Pro-TGG |
scaffold_13 |
21246387 |
21246459 |
- |
4 |
-29.5 |
70.3 |
1.430 |
14 |
0.053 |
0.612 |
-3.332 |
2 |
6 |
tRNA-SeC-TCA-1-1 |
active |
0.928 |
SeC-TCA |
scaffold_80 |
5942270 |
5942357 |
- |
1 |
-37.1 |
146.9 |
1.419 |
1 |
0.028 |
0.598 |
-4.803 |
0 |
71 |
tRNA-Ser-AGA-1-3 |
active |
0.987 |
Ser-AGA |
scaffold_61 |
7257249 |
7257331 |
- |
8 |
-32.8 |
89.6 |
1.362 |
5 |
0.075 |
0.837 |
-5.023 |
6 |
103 |
tRNA-Ser-AGA-1-1 |
active |
0.982 |
Ser-AGA |
scaffold_0 |
20359309 |
20359391 |
+ |
8 |
-32.8 |
89.6 |
1.461 |
10 |
0.054 |
0.565 |
-0.823 |
0 |
7 |
tRNA-Ser-AGA-2-1 |
active |
0.978 |
Ser-AGA |
scaffold_108 |
1745174 |
1745256 |
+ |
8 |
-32.8 |
89 |
0.348 |
4 |
0.061 |
0.928 |
-1.141 |
6 |
7 |
tRNA-Ser-AGA-2-2 |
active |
0.978 |
Ser-AGA |
scaffold_108 |
1760604 |
1760686 |
- |
8 |
-32.8 |
89 |
0.313 |
18 |
0.069 |
0.919 |
-1.382 |
4 |
9 |
tRNA-Ser-AGA-1-5 |
active |
0.976 |
Ser-AGA |
scaffold_108 |
1764413 |
1764495 |
- |
8 |
-32.8 |
89.6 |
0.101 |
6 |
0.049 |
0.806 |
-0.855 |
2 |
9 |
tRNA-Ser-AGA-1-4 |
active |
0.973 |
Ser-AGA |
scaffold_108 |
1752619 |
1752701 |
+ |
8 |
-32.8 |
89.6 |
0.321 |
18 |
0.049 |
0.854 |
-0.777 |
5 |
7 |
tRNA-Ser-AGA-1-6 |
active |
0.95 |
Ser-AGA |
scaffold_108 |
1788564 |
1788646 |
- |
8 |
-32.8 |
89.6 |
0.344 |
4 |
0.084 |
0.811 |
-0.657 |
1 |
14 |
tRNA-Ser-AGA-1-2 |
active |
0.858 |
Ser-AGA |
scaffold_38 |
20619216 |
20619298 |
+ |
8 |
-32.8 |
89.6 |
0.418 |
6 |
0.024 |
0.279 |
-1.051 |
5 |
10 |
tRNA-Ser-CGA-1-1 |
active |
0.984 |
Ser-CGA |
scaffold_61 |
8537372 |
8537454 |
+ |
4 |
-34 |
95.1 |
1.590 |
7 |
0.049 |
0.816 |
-0.986 |
1 |
80 |
tRNA-Ser-CGA-3-1 |
active |
0.982 |
Ser-CGA |
scaffold_9 |
42005040 |
42005122 |
- |
4 |
-29.8 |
89.6 |
1.573 |
7 |
0.066 |
0.764 |
-0.729 |
0 |
147 |
tRNA-Ser-CGA-2-2 |
active |
0.97 |
Ser-CGA |
scaffold_108 |
1888849 |
1888931 |
- |
4 |
-34 |
94 |
0.101 |
8 |
0.092 |
0.903 |
-0.757 |
4 |
28 |
tRNA-Ser-CGA-2-1 |
active |
0.937 |
Ser-CGA |
scaffold_108 |
1706773 |
1706855 |
+ |
4 |
-34 |
94 |
0.174 |
6 |
0.087 |
0.962 |
-0.593 |
6 |
12 |
tRNA-Ser-GCT-3-2 |
active |
0.988 |
Ser-GCT |
scaffold_61 |
8495817 |
8495899 |
- |
10 |
-30.7 |
88.4 |
1.603 |
28 |
0.049 |
0.797 |
-3.724 |
2 |
76 |
tRNA-Ser-GCT-2-1 |
active |
0.987 |
Ser-GCT |
scaffold_42 |
6973572 |
6973654 |
+ |
10 |
-30.7 |
89.1 |
1.619 |
6 |
0.045 |
0.686 |
-2.685 |
0 |
89 |
tRNA-Ser-GCT-3-1 |
active |
0.985 |
Ser-GCT |
scaffold_10 |
26279172 |
26279254 |
- |
10 |
-30.7 |
88.4 |
1.544 |
12 |
0.054 |
0.937 |
-1.197 |
0 |
44 |
tRNA-Ser-GCT-1-1 |
active |
0.981 |
Ser-GCT |
scaffold_38 |
20591093 |
20591175 |
- |
10 |
-32.8 |
91.9 |
1.356 |
29 |
0.038 |
0.542 |
-2.659 |
6 |
16 |
tRNA-Ser-GCT-4-1 |
active |
0.981 |
Ser-GCT |
scaffold_108 |
1922683 |
1922765 |
- |
10 |
-34.8 |
90 |
0.289 |
9 |
0.066 |
0.984 |
-0.790 |
0 |
22 |
tRNA-Ser-GCT-6-1 |
active |
0.981 |
Ser-GCT |
scaffold_108 |
1440604 |
1440686 |
- |
10 |
-32.8 |
91.9 |
0.333 |
11 |
0.061 |
0.930 |
-0.845 |
0 |
37 |
tRNA-Ser-GCT-1-2 |
active |
0.923 |
Ser-GCT |
scaffold_108 |
1254869 |
1254951 |
+ |
10 |
-32.8 |
91.9 |
0.300 |
9 |
0.098 |
1.123 |
-0.513 |
1 |
21 |
tRNA-Ser-GCT-5-1 |
active |
0.903 |
Ser-GCT |
scaffold_108 |
1852802 |
1852884 |
- |
10 |
-32.8 |
91.3 |
0.109 |
88 |
0.028 |
0.573 |
-0.710 |
2 |
33 |
tRNA-Ser-TGA-2-1 |
active |
0.926 |
Ser-TGA |
scaffold_15 |
17643719 |
17643801 |
+ |
3 |
-34.9 |
94 |
1.519 |
15 |
0.052 |
0.830 |
-2.618 |
0 |
8 |
tRNA-Ser-TGA-1-2 |
active |
0.906 |
Ser-TGA |
scaffold_108 |
1751518 |
1751600 |
- |
3 |
-32.8 |
89.7 |
0.318 |
1 |
0.093 |
0.909 |
-0.849 |
6 |
7 |
tRNA-Ser-TGA-1-1 |
active |
0.827 |
Ser-TGA |
scaffold_38 |
20596753 |
20596835 |
- |
3 |
-32.8 |
89.7 |
1.342 |
8 |
0.018 |
0.281 |
-3.439 |
5 |
14 |
tRNA-Sup-CTA-1-1 |
inactive |
-0.817 |
Sup-CTA |
scaffold_2 |
10757434 |
10757506 |
- |
1 |
-14 |
59.4 |
-0.295 |
32 |
0.006 |
0.127 |
-1.297 |
1 |
2 |
tRNA-Sup-TTA-1-1 |
inactive |
-0.718 |
Sup-TTA |
scaffold_20 |
11603178 |
11603249 |
+ |
1 |
-18.7 |
51.2 |
? |
61 |
0.003 |
0.000 |
? |
0 |
3 |
tRNA-Thr-AGT-7-1 |
active |
0.987 |
Thr-AGT |
scaffold_108 |
1898918 |
1898992 |
- |
8 |
-27.8 |
79.7 |
1.387 |
16 |
0.053 |
0.930 |
-2.253 |
2 |
28 |
tRNA-Thr-AGT-2-1 |
active |
0.986 |
Thr-AGT |
scaffold_61 |
7256888 |
7256962 |
- |
8 |
-25.1 |
80.3 |
1.311 |
32 |
0.048 |
0.763 |
-3.361 |
6 |
103 |
tRNA-Thr-AGT-1-1 |
active |
0.985 |
Thr-AGT |
scaffold_52 |
10000383 |
10000457 |
+ |
8 |
-27.3 |
82.6 |
1.551 |
28 |
0.063 |
0.917 |
-1.487 |
0 |
42 |
tRNA-Thr-AGT-3-1 |
active |
0.981 |
Thr-AGT |
scaffold_38 |
21174428 |
21174502 |
- |
8 |
-27 |
81.4 |
1.545 |
0 |
0.025 |
0.603 |
-3.679 |
3 |
30 |
tRNA-Thr-AGT-5-1 |
active |
0.959 |
Thr-AGT |
scaffold_61 |
8536922 |
8536996 |
+ |
8 |
-27.3 |
79.1 |
1.255 |
96 |
0.049 |
0.596 |
-4.116 |
1 |
80 |
tRNA-Thr-AGT-6-1 |
active |
0.957 |
Thr-AGT |
scaffold_108 |
1194793 |
1194867 |
- |
8 |
-30 |
82.2 |
0.088 |
35 |
0.076 |
0.608 |
-0.717 |
5 |
17 |
tRNA-Thr-AGT-4-1 |
active |
0.846 |
Thr-AGT |
scaffold_108 |
1699382 |
1699456 |
+ |
8 |
-27 |
80.4 |
0.352 |
27 |
0.053 |
0.919 |
-0.692 |
8 |
15 |
tRNA-Thr-AGT-8-1 |
inactive |
-0.871 |
Thr-AGT |
scaffold_29 |
10782018 |
10782090 |
+ |
8 |
-8.6 |
60.9 |
-0.286 |
195 |
0.003 |
0.176 |
-0.335 |
0 |
0 |
tRNA-Thr-CGT-1-1 |
active |
0.912 |
Thr-CGT |
scaffold_108 |
1219580 |
1219654 |
- |
3 |
-26.5 |
77.7 |
0.961 |
18 |
0.081 |
1.022 |
-2.753 |
1 |
23 |
tRNA-Thr-CGT-3-1 |
active |
0.885 |
Thr-CGT |
scaffold_4 |
33113996 |
33114068 |
+ |
3 |
-27 |
74 |
1.521 |
32 |
0.100 |
1.122 |
-0.107 |
0 |
20 |
tRNA-Thr-CGT-2-1 |
active |
0.877 |
Thr-CGT |
scaffold_32 |
15074014 |
15074086 |
- |
3 |
-27.3 |
78.3 |
1.222 |
62 |
0.092 |
0.864 |
0.151 |
0 |
16 |
tRNA-Thr-TGT-2-2 |
active |
0.986 |
Thr-TGT |
scaffold_21 |
33791681 |
33791754 |
- |
4 |
-29.7 |
78.8 |
1.457 |
6 |
0.078 |
0.775 |
-3.023 |
2 |
33 |
tRNA-Thr-TGT-2-1 |
active |
0.98 |
Thr-TGT |
scaffold_13 |
21458796 |
21458869 |
+ |
4 |
-29.7 |
78.8 |
1.276 |
7 |
0.039 |
0.481 |
-3.457 |
5 |
7 |
tRNA-Thr-TGT-3-1 |
active |
0.976 |
Thr-TGT |
scaffold_13 |
21250690 |
21250763 |
- |
4 |
-30.4 |
78 |
1.388 |
27 |
0.052 |
0.449 |
-4.693 |
3 |
6 |
tRNA-Thr-TGT-1-1 |
active |
0.929 |
Thr-TGT |
scaffold_108 |
1312654 |
1312728 |
+ |
4 |
-26.6 |
79.6 |
0.384 |
4 |
0.079 |
1.066 |
-0.136 |
1 |
34 |
tRNA-Trp-CCA-3-1 |
active |
0.988 |
Trp-CCA |
scaffold_61 |
7251228 |
7251300 |
- |
8 |
-24.5 |
73.4 |
1.077 |
13 |
0.044 |
0.781 |
-3.907 |
6 |
104 |
tRNA-Trp-CCA-2-1 |
active |
0.986 |
Trp-CCA |
scaffold_71 |
511998 |
512070 |
+ |
8 |
-25.1 |
75.1 |
1.281 |
7 |
0.093 |
0.981 |
-2.466 |
0 |
60 |
tRNA-Trp-CCA-7-1 |
active |
0.984 |
Trp-CCA |
scaffold_38 |
20621060 |
20621132 |
- |
8 |
-29.4 |
65.6 |
1.240 |
28 |
0.044 |
0.636 |
-2.531 |
5 |
10 |
tRNA-Trp-CCA-5-1 |
active |
0.968 |
Trp-CCA |
scaffold_9 |
3669427 |
3669499 |
- |
8 |
-25.1 |
74.3 |
1.590 |
10 |
0.054 |
0.783 |
0.652 |
1 |
16 |
tRNA-Trp-CCA-3-2 |
active |
0.966 |
Trp-CCA |
scaffold_61 |
8496255 |
8496327 |
- |
8 |
-24.5 |
73.4 |
1.526 |
5 |
0.076 |
0.728 |
-0.335 |
2 |
76 |
tRNA-Trp-CCA-1-1 |
active |
0.915 |
Trp-CCA |
scaffold_38 |
20611431 |
20611503 |
- |
8 |
-25.1 |
73.3 |
0.782 |
11 |
0.027 |
0.425 |
-0.865 |
5 |
12 |
tRNA-Trp-CCA-6-1 |
active |
0.603 |
Trp-CCA |
scaffold_6 |
18649825 |
18649897 |
+ |
8 |
-24.5 |
68.8 |
1.534 |
5 |
0.031 |
0.198 |
-0.243 |
0 |
0 |
tRNA-Trp-CCA-4-1 |
inactive |
-0.782 |
Trp-CCA |
scaffold_30 |
5417919 |
5417991 |
- |
8 |
-25.8 |
74.9 |
0.489 |
12 |
0.013 |
0.180 |
-1.242 |
0 |
42 |
tRNA-Tyr-GTA-2-1 |
active |
0.988 |
Tyr-GTA |
scaffold_18 |
8901866 |
8901955 |
+ |
15 |
-30.6 |
77.9 |
1.615 |
11 |
0.067 |
0.808 |
-3.850 |
1 |
87 |
tRNA-Tyr-GTA-1-1 |
active |
0.987 |
Tyr-GTA |
scaffold_38 |
21205525 |
21205613 |
+ |
15 |
-32.1 |
78 |
1.545 |
8 |
0.053 |
0.874 |
-3.144 |
7 |
23 |
tRNA-Tyr-GTA-3-1 |
active |
0.987 |
Tyr-GTA |
scaffold_0 |
46309497 |
46309586 |
- |
15 |
-33.3 |
75.5 |
1.190 |
12 |
0.068 |
0.870 |
-3.649 |
2 |
19 |
tRNA-Tyr-GTA-1-2 |
active |
0.986 |
Tyr-GTA |
scaffold_38 |
21209192 |
21209281 |
+ |
15 |
-27.7 |
78 |
0.630 |
7 |
0.030 |
0.530 |
-2.432 |
5 |
24 |
tRNA-Tyr-GTA-1-3 |
active |
0.982 |
Tyr-GTA |
scaffold_38 |
21212346 |
21212434 |
+ |
15 |
-28.1 |
78 |
0.781 |
7 |
0.028 |
0.538 |
-1.431 |
3 |
25 |
tRNA-Tyr-GTA-3-2 |
active |
0.966 |
Tyr-GTA |
scaffold_13 |
21249752 |
21249843 |
- |
15 |
-30 |
75.4 |
0.887 |
10 |
0.076 |
1.174 |
-3.605 |
3 |
6 |
tRNA-Tyr-GTA-4-1 |
active |
0.934 |
Tyr-GTA |
scaffold_13 |
21412988 |
21413082 |
+ |
15 |
-28.9 |
70.9 |
0.246 |
12 |
0.094 |
0.813 |
-0.520 |
5 |
7 |
tRNA-Tyr-GTA-5-1 |
active |
0.933 |
Tyr-GTA |
scaffold_13 |
21406791 |
21406885 |
+ |
15 |
-29.4 |
70.6 |
0.208 |
12 |
0.093 |
0.803 |
-0.520 |
5 |
6 |
tRNA-Tyr-GTA-3-3 |
active |
0.932 |
Tyr-GTA |
scaffold_13 |
21265438 |
21265532 |
+ |
15 |
-31.8 |
75.3 |
0.246 |
12 |
0.093 |
0.792 |
-0.520 |
1 |
6 |
tRNA-Tyr-GTA-7-1 |
active |
0.931 |
Tyr-GTA |
scaffold_13 |
21403706 |
21403800 |
+ |
15 |
-27.6 |
62.4 |
0.246 |
12 |
0.092 |
0.789 |
-0.520 |
4 |
6 |
tRNA-Tyr-GTA-6-1 |
active |
0.924 |
Tyr-GTA |
scaffold_13 |
21416113 |
21416207 |
+ |
15 |
-26.5 |
66.3 |
0.230 |
12 |
0.099 |
0.830 |
-0.520 |
4 |
7 |
tRNA-Tyr-GTA-4-2 |
active |
0.918 |
Tyr-GTA |
scaffold_3118 |
2717 |
2811 |
+ |
15 |
-28.9 |
70.9 |
0.246 |
12 |
0.091 |
0.777 |
-0.520 |
0 |
0 |
tRNA-Val-AAC-1-2 |
active |
0.988 |
Val-AAC |
scaffold_100 |
2300007 |
2300080 |
+ |
6 |
-24.7 |
79.4 |
1.466 |
2 |
0.041 |
0.723 |
-5.607 |
0 |
29 |
tRNA-Val-AAC-1-1 |
active |
0.987 |
Val-AAC |
scaffold_21 |
33788337 |
33788410 |
- |
6 |
-24.7 |
79.4 |
0.183 |
19 |
0.071 |
0.928 |
-4.261 |
2 |
33 |
tRNA-Val-AAC-1-3 |
active |
0.984 |
Val-AAC |
scaffold_108 |
1689670 |
1689743 |
+ |
6 |
-24.7 |
79.4 |
0.285 |
15 |
0.053 |
0.751 |
-1.438 |
4 |
15 |
tRNA-Val-AAC-1-5 |
active |
0.978 |
Val-AAC |
scaffold_108 |
1883382 |
1883455 |
- |
6 |
-24.7 |
79.4 |
0.258 |
14 |
0.054 |
0.859 |
-1.091 |
4 |
27 |
tRNA-Val-AAC-2-1 |
active |
0.945 |
Val-AAC |
scaffold_38 |
21339270 |
21339343 |
- |
6 |
-26.9 |
79.1 |
0.309 |
8 |
0.043 |
0.700 |
-0.351 |
3 |
13 |
tRNA-Val-AAC-1-4 |
active |
0.81 |
Val-AAC |
scaffold_108 |
1703125 |
1703198 |
+ |
6 |
-24.7 |
79.4 |
0.161 |
14 |
0.067 |
0.994 |
-0.161 |
8 |
12 |
tRNA-Val-CAC-1-2 |
active |
0.989 |
Val-CAC |
scaffold_38 |
21178579 |
21178652 |
+ |
6 |
-24.7 |
79.4 |
1.318 |
2 |
0.074 |
0.669 |
-3.715 |
2 |
30 |
tRNA-Val-CAC-1-1 |
active |
0.987 |
Val-CAC |
scaffold_21 |
33827050 |
33827123 |
- |
6 |
-24.7 |
79.4 |
1.319 |
2 |
0.057 |
1.016 |
-3.060 |
0 |
23 |
tRNA-Val-CAC-1-3 |
active |
0.987 |
Val-CAC |
scaffold_56 |
11153263 |
11153336 |
- |
6 |
-24.7 |
79.4 |
1.016 |
9 |
0.041 |
0.512 |
-2.413 |
1 |
27 |
tRNA-Val-CAC-2-1 |
active |
0.984 |
Val-CAC |
scaffold_334 |
418808 |
418881 |
+ |
6 |
-22.5 |
80.4 |
0.189 |
7 |
0.048 |
0.920 |
-2.146 |
1 |
41 |
tRNA-Val-CAC-3-1 |
active |
0.971 |
Val-CAC |
scaffold_108 |
1891636 |
1891711 |
+ |
6 |
-25.4 |
69.5 |
0.368 |
7 |
0.072 |
0.505 |
-0.735 |
4 |
28 |
tRNA-Val-CAC-1-4 |
active |
0.765 |
Val-CAC |
scaffold_108 |
1694643 |
1694716 |
+ |
6 |
-24.7 |
79.4 |
-0.067 |
5 |
0.072 |
0.786 |
0.000 |
5 |
15 |
tRNA-Val-TAC-1-1 |
active |
0.929 |
Val-TAC |
scaffold_59 |
1393046 |
1393119 |
- |
3 |
-23.6 |
82.9 |
1.240 |
24 |
0.043 |
0.733 |
-5.240 |
0 |
25 |
tRNA-Val-TAC-2-2 |
active |
0.913 |
Val-TAC |
scaffold_86 |
375166 |
375239 |
+ |
3 |
-23.6 |
80.5 |
0.354 |
7 |
0.093 |
0.991 |
-0.871 |
6 |
40 |
tRNA-Val-TAC-2-1 |
active |
0.894 |
Val-TAC |
scaffold_86 |
374859 |
374932 |
+ |
3 |
-23.6 |
80.5 |
0.346 |
16 |
0.072 |
0.851 |
-0.563 |
6 |
39 |
tRNA-iMet-CAT-1-3 |
active |
0.985 |
iMet-CAT |
scaffold_38 |
20597252 |
20597324 |
- |
15 |
-26.1 |
60.4 |
1.056 |
4 |
0.027 |
0.615 |
-2.167 |
4 |
14 |
tRNA-iMet-CAT-1-1 |
active |
0.984 |
iMet-CAT |
scaffold_10 |
14659221 |
14659293 |
+ |
15 |
-26.1 |
60.4 |
1.610 |
14 |
0.025 |
0.511 |
-4.298 |
0 |
93 |
tRNA-iMet-CAT-1-4 |
active |
0.984 |
iMet-CAT |
scaffold_108 |
1613199 |
1613271 |
+ |
15 |
-26.1 |
60.4 |
1.235 |
11 |
0.057 |
0.763 |
-1.585 |
0 |
22 |
tRNA-iMet-CAT-1-6 |
active |
0.971 |
iMet-CAT |
scaffold_108 |
1829969 |
1830041 |
+ |
15 |
-26.1 |
60.4 |
0.336 |
3 |
0.070 |
0.735 |
-0.751 |
1 |
29 |
tRNA-iMet-CAT-1-5 |
active |
0.968 |
iMet-CAT |
scaffold_108 |
1759654 |
1759726 |
+ |
15 |
-26.1 |
60.4 |
0.320 |
6 |
0.082 |
0.933 |
-1.015 |
4 |
9 |
tRNA-iMet-CAT-2-1 |
active |
0.947 |
iMet-CAT |
scaffold_108 |
1729603 |
1729675 |
+ |
15 |
-26.1 |
60.2 |
0.202 |
49 |
0.078 |
1.033 |
-0.872 |
4 |
14 |
tRNA-iMet-CAT-1-2 |
active |
0.876 |
iMet-CAT |
scaffold_38 |
20582414 |
20582486 |
+ |
15 |
-26.1 |
60.4 |
0.723 |
5 |
0.023 |
0.413 |
-0.881 |
2 |
18 |
tRNA-iMet-CAT-3-1 |
inactive |
-0.501 |
iMet-CAT |
scaffold_38 |
20620245 |
20620317 |
- |
15 |
-24.3 |
50.5 |
0.316 |
5 |
0.019 |
0.279 |
-1.183 |
5 |
10 |
Inquiries should be directed to Bryan Thornlow
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